RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 LIPJQ5W064 366 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 NR4A3Q92570 626 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 TRIB3Q96RU7 358 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 TSSK6Q9BXA6 273 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 LGR4Q9BXB1 951 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 BTBD1Q9H0C5 482 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 REEP4Q9H6H4 257 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 ZNF696Q9H7X3 374 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 GNB5O14775 395 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 GMFGO60234 142 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 CPNE3O75131 537 aaKnown RBP10.41□□□□□ -0.74
CD44-201ENST00000263398 DHRS4L1P0CG22 281 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 TYRP14679 529 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 SEC13P55735 322 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 RBBP4Q09028 425 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 OGFRL1Q5TC84 451 aaPredicted RBP10.41□□□□□ -0.74
CD44-201ENST00000263398 ZNF517Q6ZMY9 492 aaPredicted RBP10.41□□□□□ -0.74
CD44-201ENST00000263398 ABHD13Q7L211 337 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 ZFAND4Q86XD8 727 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 OR4K1Q8NGD4 311 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 C15orf40Q8WUR7 153 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 MARCH4Q9P2E8 410 aaPredicted RBP10.41□□□□□ -0.74
CD44-201ENST00000263398 EEDO75530 441 aaKnown RBP10.41□□□□□ -0.74
CD44-201ENST00000263398 CDRT1O95170 752 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 GBAP04062 536 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 BCKDHAP12694 445 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 GLDCP23378 1020 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 ATP5A1P25705 553 aaKnown RBP10.41□□□□□ -0.74
CD44-201ENST00000263398 ETV4P43268 484 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 WNT7BP56706 349 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 GALNT1Q10472 559 aaPredicted RBP10.41□□□□□ -0.74
CD44-201ENST00000263398 CNKSR3Q6P9H4 555 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 ENPP7Q6UWV6 458 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 B3GNT9Q6UX72 402 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 GPALPP1Q8IXQ4 340 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 CELF5Q8N6W0 485 aaKnown RBP10.41□□□□□ -0.74
CD44-201ENST00000263398 IGSF8Q969P0 613 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 MOCOSQ96EN8 888 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 SYT11Q9BT88 431 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 NDC1Q9BTX1 674 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 ELAC1Q9H777 363 aaKnown RBP10.41□□□□□ -0.74
CD44-201ENST00000263398 MYO9BQ13459 2157 aa10.41□□□□□ -0.74
CD44-201ENST00000263398 A0A075B6Q4 140 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 A0A0J9YVX5 310 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 SOX14O95416 240 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 ZNF8P17098 575 aaPredicted RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 FUT4P22083 530 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 ACADLP28330 430 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 GHRHRQ02643 423 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 TMEM115Q12893 351 aaPredicted RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 RAB39AQ14964 217 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 CMPK2Q5EBM0 449 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 NIPAL1Q6NVV3 410 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 ASB18Q6ZVZ8 466 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 TMCO2Q7Z6W1 182 aaPredicted RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 TCEANCQ8N8B7 351 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 TMEM80Q96HE8 168 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 CD180Q99467 661 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 BHLHE41Q9C0J9 482 aaPredicted RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 TBCCD1Q9NVR7 557 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 CNOT11Q9UKZ1 510 aaKnown RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 BAIAP2Q9UQB8 552 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 INSL6Q9Y581 213 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 DNAJC15Q9Y5T4 150 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 CFAP20Q9Y6A4 193 aaKnown RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 ANKRD12Q6UB98 2062 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 COCHO43405 550 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 MMP20O60882 483 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 RAB36O95755 333 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 ACRP10323 421 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 HSD3B1P14060 373 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 HSD17B1P14061 328 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 HSD3B2P26439 372 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 ELK4P28324 431 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 PREPP48147 710 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 HLCSP50747 726 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 DGKEP52429 567 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 LASP1Q14847 261 aaKnown RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 C2orf27AQ580R0 203 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 SERINC5Q86VE9 423 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 RNF130Q86XS8 419 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 ZNF280BQ86YH2 543 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 CENPSQ8N2Z9 138 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 TOMM5Q8N4H5 51 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 ANKFN1Q8N957 763 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 FBXO15Q8NCQ5 510 aaPredicted RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 KXD1Q9BQD3 176 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 PRRG4Q9BZD6 226 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 HAPLN2Q9GZV7 340 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 POLMQ9NP87 494 aaPredicted RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 OARD1Q9Y530 152 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 GMEB1Q9Y692 573 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 WNT6Q9Y6F9 365 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 CICQ96RK0 1608 aaPredicted RBP10.4□□□□□ -0.74
CD44-201ENST00000263398 ZCWPW2A0A1B0GU75 182 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 A0A1W2PRQ8 180 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 KMOO15229 486 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 INPPL1O15357 1258 aa10.4□□□□□ -0.74
CD44-201ENST00000263398 SEMA3DO95025 777 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms