RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SRCP12931 536 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 NPR2P20594 1047 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 FPR1P21462 350 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 VAMP2P63027 116 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 FAM214AQ32MH5 1076 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 ENPP6Q6UWR7 440 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 PNPLA1Q8N8W4 532 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 C9orf43Q8TAL5 461 aaPredicted RBP11.69□□□□□ -0.54
SMG6-201ENST00000263073 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 NDC1Q9BTX1 674 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 SEC61A2Q9H9S3 476 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 CALML5Q9NZT1 146 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 GJD2Q9UKL4 321 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 COQ4Q9Y3A0 265 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 COL1A2P08123 1366 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 TTC34A8MYJ7 566 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 INMT-MINDY4F8WBC2 141 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 CLDN4O14493 209 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 FLT3LGP49771 235 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 CLCN2P51788 898 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 TUBA1BP68363 451 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 CEACAM7Q14002 265 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 DSG2Q14126 1118 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 TUBA1AQ71U36 451 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 GJD3Q8N144 294 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 SCML4Q8N228 414 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 RASGEF1AQ8N9B8 481 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 FNDC8Q8TC99 324 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 SMURF1Q9HCE7 757 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 ZFR2Q9UPR6 939 aaKnown RBP11.69□□□□□ -0.54
SMG6-201ENST00000263073 MT-ND2P03891 347 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 MPIP34949 423 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 RAB8AP61006 207 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 PYHIN1Q6K0P9 492 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 FAM180BQ6P0A1 224 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 VITQ6UXI7 678 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 ADGRD2Q7Z7M1 963 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 CILP2Q8IUL8 1156 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 ANKFN1Q8N957 763 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 NCSTNQ92542 709 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 SHISA4Q96DD7 197 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 SIGLEC10Q96LC7 697 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 YTHDF1Q9BYJ9 559 aaKnown RBP11.69□□□□□ -0.54
SMG6-201ENST00000263073 SMOXQ9NWM0 555 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 EDARQ9UNE0 448 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 IFT172Q9UG01 1749 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 NRP1O14786 923 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 PLD2O14939 933 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 GATBO75879 557 aaKnown RBP11.69□□□□□ -0.54
SMG6-201ENST00000263073 CNTN5O94779 1100 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 STSP08842 583 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 PREPP48147 710 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 ZNF423Q2M1K9 1284 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 RAB6CQ53S08 254 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 CDKL4Q5MAI5 379 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 GARNL3Q5VVW2 1013 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 SLC24A5Q71RS6 500 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 LHFPL3Q86UP9 236 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 CEP97Q8IW35 865 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 RAB6CQ9H0N0 254 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 TRIM36Q9NQ86 728 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 SLC39A1Q9NY26 324 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 TAS2R3Q9NYW6 316 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 E7EQ34 232 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 ALDOAP04075 364 aaKnown RBP11.69□□□□□ -0.54
SMG6-201ENST00000263073 AP1S1P61966 158 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 CD47Q08722 323 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 PTCHD3Q3KNS1 767 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 LRRC69Q6ZNQ3 347 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 CCDC107Q8WV48 283 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 MKLN1Q9UL63 735 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 PADI2Q9Y2J8 665 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 TMEM98Q9Y2Y6 226 aa11.69□□□□□ -0.54
SMG6-201ENST00000263073 EDNRBP24530 442 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.68□□□□□ -0.54
SMG6-201ENST00000263073 C1orf94Q6P1W5 598 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 SHFQ7M4L6 423 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 NDNFQ8TB73 568 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 PPIL3Q9H2H8 161 aaKnown RBP11.68□□□□□ -0.54
SMG6-201ENST00000263073 ADAM7Q9H2U9 754 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 SH2B3Q9UQQ2 575 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 FAM72CH0Y354 149 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 KIAA0513O60268 411 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 CELP19835 753 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 EXOC3L2Q2M3D2 409 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 FAM72AQ5TYM5 149 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 TXNDC8Q6A555 127 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 TCEAL6Q6IPX3 200 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 FAM72DQ6L9T8 149 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 CCBE1Q6UXH8 406 aaPredicted RBP11.68□□□□□ -0.54
SMG6-201ENST00000263073 FAM72BQ86X60 149 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 CPA6Q8N4T0 437 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 ZNF226Q9NYT6 803 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 TLR6Q9Y2C9 796 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 MEMO1Q9Y316 297 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 A0A1W2PRU2 124 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 MATN1P21941 496 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 ZXDBP98169 803 aa11.68□□□□□ -0.54
SMG6-201ENST00000263073 C18orf21Q32NC0 220 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms