RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 CWH43Q9H720 699 aa12.48□□□□□ -0.41
SEC23B-201ENST00000262544 TM9SF3Q9HD45 589 aa12.48□□□□□ -0.41
SEC23B-201ENST00000262544 ADPRHL2Q9NX46 363 aa12.48□□□□□ -0.41
SEC23B-201ENST00000262544 WDR87Q6ZQQ6 2873 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 TRBV5-3A0A0A0MS03 114 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 GFRA2O00451 464 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 TLL1O43897 1013 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 LEFTY1O75610 366 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 CKMT1AP12532 417 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 GRIN2CQ14957 1233 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 GPR33Q49SQ1 333 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 C6orf183Q5T699 404 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 CHPFQ8IZ52 775 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 VPS37AQ8NEZ2 397 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 NEIL2Q969S2 332 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 RNF6Q9Y252 685 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 A6NL46 340 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 TTC34A8MYJ7 566 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 RFPL2O75678 378 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 IGFBP1P08833 259 aaPredicted RBP12.47□□□□□ -0.41
SEC23B-201ENST00000262544 CCDC159P0C7I6 412 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 RCVRNP35243 200 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 SPINT3P49223 89 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 METAP1P53582 386 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 HBA1P69905 142 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 EXOC3L2Q2M3D2 409 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 RFX4Q33E94 735 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 RPS26P11Q5JNZ5 115 aaPredicted RBP12.47□□□□□ -0.41
SEC23B-201ENST00000262544 DEPDC1Q5TB30 811 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 ASTLQ6HA08 431 aaPredicted RBP12.47□□□□□ -0.41
SEC23B-201ENST00000262544 RNF130Q86XS8 419 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 LGI4Q8N135 537 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 OR10G2Q8NGC3 310 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 ING5Q8WYH8 240 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 RAB8BQ92930 207 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 SMAD5Q99717 465 aaKnown RBP12.47□□□□□ -0.41
SEC23B-201ENST00000262544 SLC12A9Q9BXP2 914 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
SEC23B-201ENST00000262544 H3BN98 237 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 WBP4O75554 376 aaKnown RBP12.46□□□□□ -0.41
SEC23B-201ENST00000262544 KLK1P06870 262 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 PABPC1P11940 636 aaKnown RBP12.46□□□□□ -0.41
SEC23B-201ENST00000262544 HLA-EP13747 358 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 RPS3P23396 243 aaKnown RBP eCLIP12.46□□□□□ -0.413e-7■■■■■ 40.5
SEC23B-201ENST00000262544 KDM4DQ6B0I6 523 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 TMEM220Q6QAJ8 160 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 ZNF605Q86T29 641 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 ASZ1Q8WWH4 475 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 SLC35A5Q9BS91 424 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 CENPOQ9BU64 300 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 DSN1Q9H410 356 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 SH2B3Q9UQQ2 575 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 B3GNT3Q9Y2A9 372 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 GBF1Q92538 1859 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 SYNDIG1LA6NDD5 238 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 PCDH17O14917 1159 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 SLC22A1O15245 554 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 IGHA2P01877 340 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 ACRP10323 421 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 GRK5P34947 590 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 TGM4P49221 684 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 GZMMP51124 257 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 C2orf80Q0P641 193 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 ST3GAL4Q11206 333 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 CALHM3Q86XJ0 350 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 CELF5Q8N6W0 485 aaKnown RBP12.46□□□□□ -0.41
SEC23B-201ENST00000262544 CSGALNACT1Q8TDX6 532 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 TCEAL4Q96EI5 215 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 RDH12Q96NR8 316 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 OR4K3Q96R72 315 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 SLC29A3Q9BZD2 475 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 WDR12Q9GZL7 423 aaKnown RBP12.46□□□□□ -0.41
SEC23B-201ENST00000262544 ERVK13-1Q9NX77 482 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 SLC25A13Q9UJS0 675 aa12.46□□□□□ -0.41
SEC23B-201ENST00000262544 TFECO14948 347 aaPredicted RBP12.46□□□□□ -0.42
SEC23B-201ENST00000262544 SLC16A6O15403 523 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 NME6O75414 186 aaPredicted RBP12.46□□□□□ -0.42
SEC23B-201ENST00000262544 GABARAPO95166 117 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 PTHP01270 115 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 ALPPL2P10696 532 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 NR4A2P43354 598 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 WNT3P56703 355 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 CNTN1Q12860 1018 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 OXA1LQ15070 435 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 CDKN3Q16667 212 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 ZNF385BQ569K4 471 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 LRIF1Q5T3J3 769 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 THOC7Q6I9Y2 204 aaKnown RBP12.46□□□□□ -0.42
SEC23B-201ENST00000262544 OR8H2Q8N162 312 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 TMEM203Q969S6 136 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 ZNF556Q9HAH1 456 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 MS4A12Q9NXJ0 267 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 SRRDQ9UH36 339 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 ATP11BQ9Y2G3 1177 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 WNT6Q9Y6F9 365 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 F5P12259 2224 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 CNTRLQ7Z7A1 2325 aa12.46□□□□□ -0.42
SEC23B-201ENST00000262544 H3BM21 787 aa12.45□□□□□ -0.42
SEC23B-201ENST00000262544 LEFTY2O00292 366 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms