RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MED8Q96G25 268 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 CDK5RAP1Q96SZ6 601 aaKnown RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 SDHCQ99643 169 aaPredicted RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 TMEM121BQ9BXQ6 578 aaPredicted RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 NXF2Q9GZY0 626 aaKnown RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 CCDC59Q9P031 241 aaKnown RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 WBP11Q9Y2W2 641 aaKnown RBP16.82■□□□□ 0.28
TRAM1-201ENST00000262213 PCDHGA2Q9Y5H1 932 aa16.82■□□□□ 0.28
TRAM1-201ENST00000262213 TMEM229AB2RXF0 380 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 INPPL1O15357 1258 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 GCM2O75603 506 aaPredicted RBP16.81■□□□□ 0.28
TRAM1-201ENST00000262213 CKBP12277 381 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 SLC15A1P46059 708 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 AP1S1P61966 158 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 SMAD3P84022 425 aaKnown RBP16.81■□□□□ 0.28
TRAM1-201ENST00000262213 DAB2P98082 770 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 NDUFA5Q16718 116 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 VASH1Q7L8A9 365 aaPredicted RBP16.81■□□□□ 0.28
TRAM1-201ENST00000262213 PGBD3Q8N328 593 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 C1orf52Q8N6N3 182 aaKnown RBP16.81■□□□□ 0.28
TRAM1-201ENST00000262213 OR4A15Q8NGL6 344 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 WDR36Q8NI36 951 aaKnown RBP16.81■□□□□ 0.28
TRAM1-201ENST00000262213 VANGL1Q8TAA9 524 aaPredicted RBP16.81■□□□□ 0.28
TRAM1-201ENST00000262213 FAM120CQ9NX05 1096 aaKnown RBP16.81■□□□□ 0.28
TRAM1-201ENST00000262213 TRPM5Q9NZQ8 1165 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 CCDC88CQ9P219 2028 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 PCDH17O14917 1159 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 ETHE1O95571 254 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 PIK3CBP42338 1070 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 TAB1Q15750 504 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 TRIM71Q2Q1W2 868 aaKnown RBP16.81■□□□□ 0.28
TRAM1-201ENST00000262213 ZMAT1Q5H9K5 638 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 L3MBTL4Q8NA19 623 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 FBXO22Q8NEZ5 403 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 MGLLQ99685 303 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 ARHGAP39Q9C0H5 1083 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 ACSL6Q9UKU0 697 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 GABRQQ9UN88 632 aa16.81■□□□□ 0.28
TRAM1-201ENST00000262213 CFAP20Q9Y6A4 193 aaKnown RBP16.81■□□□□ 0.28
TRAM1-201ENST00000262213 GNG14A0A1W2PPG7 69 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 E7EQ34 232 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 NDUFB5O43674 189 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 ANXA4P09525 319 aaPredicted RBP16.8■□□□□ 0.28
TRAM1-201ENST00000262213 TGM4P49221 684 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 TSTA3Q13630 321 aaPredicted RBP16.8■□□□□ 0.28
TRAM1-201ENST00000262213 VEZF1Q14119 521 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 LRRC26Q2I0M4 334 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 LYPLAL1Q5VWZ2 237 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 BBS7Q8IWZ6 715 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 HS6ST3Q8IZP7 471 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 SLC22A12Q96S37 553 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 YME1L1Q96TA2 773 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 SLC12A9Q9BXP2 914 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 PLCXD1Q9NUJ7 323 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 FAM227AF5H4B4 570 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 ADAMDEC1O15204 470 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 ARHGEF15O94989 841 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 CKMT1AP12532 417 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 SLC6A12P48065 614 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 ABRQ12979 859 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 CDKN3Q16667 212 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 GGTA1PQ4G0N0 100 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 CRTC1Q6UUV9 634 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 C11orf65Q8NCR3 313 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 OR5AK3PQ8NH89 298 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 NFKBIDQ8NI38 313 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 HHIPQ96QV1 700 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 IL4I1Q96RQ9 567 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 SLC30A2Q9BRI3 323 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 TTLL2Q9BWV7 592 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 RERGLQ9H628 205 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 ZNF556Q9HAH1 456 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 ZDHHC3Q9NYG2 299 aa16.8■□□□□ 0.28
TRAM1-201ENST00000262213 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
TRAM1-201ENST00000262213 PNMA8CA0A1B0GUJ8 204 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 ANKRD34BA5PLL1 514 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 ADAMTS4O75173 837 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 JUPP14923 745 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 TNFSF8P32971 234 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 SELENOWP63302 87 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 GPR33Q49SQ1 333 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 TMC5Q6UXY8 1006 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 MSANTD1Q6ZTZ1 278 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 ASB11Q8WXH4 323 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 SOCS4Q8WXH5 440 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 CWH43Q9H720 699 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 MKLN1Q9UL63 735 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 PRAMEF25A6NGN4 478 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 H3BQ06 376 aaPredicted RBP16.79■□□□□ 0.28
TRAM1-201ENST00000262213 ARHGAP33O14559 1287 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 SCAMP2O15127 329 aaKnown RBP16.79■□□□□ 0.28
TRAM1-201ENST00000262213 GUCY1B2O75343 617 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 CCND3P30281 292 aaPredicted RBP16.79■□□□□ 0.28
TRAM1-201ENST00000262213 SOX3P41225 446 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 IRF3Q14653 427 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 FBXO43Q4G163 708 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 MFSD14CQ5VZR4 134 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 METTL2BQ6P1Q9 378 aaKnown RBP16.79■□□□□ 0.28
TRAM1-201ENST00000262213 NPAS3Q8IXF0 933 aa16.79■□□□□ 0.28
TRAM1-201ENST00000262213 OR8J2Q8NGG1 315 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms