RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CDKL1Q00532 357 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 LCP2Q13094 533 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 SP140Q13342 867 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 RAPSNQ13702 412 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 LRP8Q14114 963 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.75□□□□□ -0.37
SGCA-201ENST00000262018 PYCR3Q53H96 274 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 METTL2BQ6P1Q9 378 aaKnown RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 TMEM220Q6QAJ8 160 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 SLC9B2Q86UD5 537 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 LRRTM4Q86VH4 590 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 PPP1R3BQ86XI6 285 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 CLYBLQ8N0X4 340 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 CFAP61Q8NHU2 1237 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 AGAP11Q8TF27 550 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 UBTD2Q8WUN7 234 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 ASZ1Q8WWH4 475 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 ELMO1Q92556 727 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 PTCD3Q96EY7 689 aaKnown RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 NSL1Q96IY1 281 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 ZNF514Q96K75 400 aaPredicted RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 NSUN5Q96P11 429 aaKnown RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 TGM7Q96PF1 710 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 OR52B2Q96RD2 323 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 CCM2Q9BSQ5 444 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 NUF2Q9BZD4 464 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 EPB41L1Q9H4G0 881 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 TCF7L2Q9NQB0 619 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 ARL8BQ9NVJ2 186 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 UTP6Q9NYH9 597 aaKnown RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 ZNHIT2Q9UHR6 403 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 TSR3Q9UJK0 312 aaKnown RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 FARSAQ9Y285 508 aaKnown RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 SLC5A10A0PJK1 596 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 OR2AG2A6NM03 316 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 TMEM233B4DJY2 109 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 E2F3O00716 465 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 SDHDO14521 159 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 KMOO15229 486 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 TAPBPO15533 448 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 RASSF9O75901 435 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 MLYCDO95822 493 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 C9P02748 559 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 SNRPB2P08579 225 aaKnown RBP12.74□□□□□ -0.37
SGCA-201ENST00000262018 GSTM1P09488 218 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 TYRP1P17643 537 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 VCLP18206 1134 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 TSPAN8P19075 237 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 GSTM4Q03013 218 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 BTKQ06187 659 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 HSPA14Q0VDF9 509 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 BOP1Q14137 746 aaKnown RBP12.74□□□□□ -0.37
SGCA-201ENST00000262018 TESK1Q15569 626 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 PDCD2Q16342 344 aaPredicted RBP12.74□□□□□ -0.37
SGCA-201ENST00000262018 PHKG1Q16816 387 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 UGT3A2Q3SY77 523 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 ZNF658BQ4V348 819 aaPredicted RBP12.74□□□□□ -0.37
SGCA-201ENST00000262018 KANK2Q63ZY3 851 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 SULT1C3Q6IMI6 304 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 IYDQ6PHW0 289 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 ASRGL1Q7L266 308 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 TREML1Q86YW5 311 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 TRAPPC5Q8IUR0 188 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 VRK3Q8IV63 474 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 BEND7Q8N7W2 519 aaPredicted RBP12.74□□□□□ -0.37
SGCA-201ENST00000262018 MAGEC3Q8TD91 643 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 TRPC4APQ8TEL6 797 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 ASB11Q8WXH4 323 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 SMAD5Q99717 465 aaKnown RBP12.74□□□□□ -0.37
SGCA-201ENST00000262018 WDR55Q9H6Y2 383 aaPredicted RBP12.74□□□□□ -0.37
SGCA-201ENST00000262018 MEAF6Q9HAF1 191 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 ZBTB26Q9HCK0 441 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 TBC1D29Q9UFV1 150 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 B3GNT3Q9Y2A9 372 aa12.74□□□□□ -0.37
SGCA-201ENST00000262018 GFYI3L273 518 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 PPP6CO00743 305 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 AZIN1O14977 448 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 JUNP05412 331 aaKnown RBP12.73□□□□□ -0.37
SGCA-201ENST00000262018 CALB2P22676 271 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 PTGER4P35408 488 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 LSM12Q3MHD2 195 aaKnown RBP12.73□□□□□ -0.37
SGCA-201ENST00000262018 TTC23LQ6PF05 361 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 CRTC3Q6UUV7 619 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 SPNS3Q6ZMD2 512 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 CHST15Q7LFX5 561 aaPredicted RBP12.73□□□□□ -0.37
SGCA-201ENST00000262018 ST6GALNAC3Q8NDV1 305 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 ACTRT2Q8TDY3 377 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 RHBDF1Q96CC6 855 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 LINC00615Q96LM1 132 aaPredicted RBP12.73□□□□□ -0.37
SGCA-201ENST00000262018 ZNF382Q96SR6 550 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 TIMM29Q9BSF4 260 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 HGH1Q9BTY7 390 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 MID1IP1Q9NPA3 183 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 SEMA4BQ9NPR2 832 aaPredicted RBP12.73□□□□□ -0.37
SGCA-201ENST00000262018 ARMCX1Q9P291 453 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 TRIM33Q9UPN9 1127 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 PDE10AQ9Y233 779 aa12.73□□□□□ -0.37
SGCA-201ENST00000262018 STK38LQ9Y2H1 464 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms