RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 AGAP6Q5VW22 663 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 B3GNT8Q7Z7M8 397 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 ADHFE1Q8IWW8 467 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 SETD9Q8NE22 299 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 OR5K1Q8NHB7 308 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 PYURFQ96I23 114 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 AGAP4Q96P64 663 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 DCSTAMPQ9H295 470 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 CCDC177Q9NQR7 707 aaPredicted RBP21.78■■□□□ 1.08
MCF2L-201ENST00000261963 FAM8A1Q9UBU6 413 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 HELZP42694 1942 aaKnown RBP21.78■■□□□ 1.08
MCF2L-201ENST00000261963 UPK3BL1B0FP48 263 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 UPK3BL2E5RIL1 263 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 MFN2O95140 757 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 KIR3DL1P43629 444 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 TUBA1BP68363 451 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 FADDQ13158 208 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 RFX4Q33E94 735 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 HENMT1Q5T8I9 393 aaKnown RBP21.78■■□□□ 1.08
MCF2L-201ENST00000261963 MSANTD1Q6ZTZ1 278 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 TUBA1AQ71U36 451 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 UTS2BQ765I0 119 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 METTL4Q8N3J2 472 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 ASZ1Q8WWH4 475 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 FOXJ1Q92949 421 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 RIOK2Q9BVS4 552 aaKnown RBP21.78■■□□□ 1.08
MCF2L-201ENST00000261963 REXO4Q9GZR2 422 aaKnown RBP21.78■■□□□ 1.08
MCF2L-201ENST00000261963 MIR1-1HGQ9H1L0 117 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 VNN3Q9NY84 501 aa21.78■■□□□ 1.08
MCF2L-201ENST00000261963 SCN2BO60939 215 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 AP2A2O94973 939 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 FADS2O95864 444 aaKnown RBP21.77■■□□□ 1.08
MCF2L-201ENST00000261963 FTH1P02794 183 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 MT-ND2P03891 347 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 GSTM1P09488 218 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 CYP2A6P11509 494 aaPredicted RBP21.77■■□□□ 1.08
MCF2L-201ENST00000261963 TIMP2P16035 220 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 CD36P16671 472 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 GTF2E2P29084 291 aaKnown RBP21.77■■□□□ 1.08
MCF2L-201ENST00000261963 WNT3P56703 355 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 UGT8Q16880 541 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 PNCKQ6P2M8 343 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 WDR20Q8TBZ3 569 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 CSGALNACT1Q8TDX6 532 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 CYB5D2Q8WUJ1 264 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 MRGPRX3Q96LB0 322 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 SPHK2Q9NRA0 654 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 ERVW-1Q9UQF0 538 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 CLDN24A6NM45 220 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 RECQL5O94762 991 aaPredicted RBP21.77■■□□□ 1.08
MCF2L-201ENST00000261963 ALX3O95076 343 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 MAGEA2P43356 314 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 RECQLP46063 649 aaPredicted RBP21.77■■□□□ 1.08
MCF2L-201ENST00000261963 IRF8Q02556 426 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 MVKQ03426 396 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 ARSIQ5FYB1 569 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 ZC3H12BQ5HYM0 836 aaKnown RBP21.77■■□□□ 1.08
MCF2L-201ENST00000261963 LY6G5CQ5SRR4 150 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 IL17RDQ8NFM7 739 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 C6orf62Q9GZU0 229 aaPredicted RBP21.77■■□□□ 1.08
MCF2L-201ENST00000261963 MTG2Q9H4K7 406 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 NPAP1Q9NZP6 1156 aa21.77■■□□□ 1.08
MCF2L-201ENST00000261963 TMEFF2Q9UIK5 374 aaPredicted RBP21.77■■□□□ 1.08
MCF2L-201ENST00000261963 METTL15A6NJ78 407 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 EVPLLA8MZ36 301 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 CTSLP07711 333 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 PRKCAP17252 672 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 PRPS1L1P21108 318 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 CLK1P49759 484 aaKnown RBP21.76■■□□□ 1.07
MCF2L-201ENST00000261963 ABRQ12979 859 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 LIPJQ5W064 366 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 TRAM1L1Q8N609 369 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 NELL1Q92832 810 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 ACOT13Q9NPJ3 140 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 DDX28Q9NUL7 540 aaKnown RBP21.76■■□□□ 1.07
MCF2L-201ENST00000261963 TDP1Q9NUW8 608 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 E7EQ34 232 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 HAT1O14929 419 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 PSIP1O75475 530 aaKnown RBP21.76■■□□□ 1.07
MCF2L-201ENST00000261963 ITGAMP11215 1152 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 CTSCP53634 463 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 ZNF45Q02386 682 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 CCSMST1Q4G0I0 132 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 CCDC58Q4VC31 144 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 ATAD3CQ5T2N8 411 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 ZNF544Q6NX49 715 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 GDPD3Q7L5L3 318 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 THOC6Q86W42 341 aaKnown RBP21.76■■□□□ 1.07
MCF2L-201ENST00000261963 LILRA3Q8N6C8 439 aaPredicted RBP21.76■■□□□ 1.07
MCF2L-201ENST00000261963 U3KQV3 271 aa21.76■■□□□ 1.07
MCF2L-201ENST00000261963 NUP214P35658 2090 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-201ENST00000261963 TSPAN11A1L157 253 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 PDZK1P1A8MUH7 402 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 TSPAN6O43657 245 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 RGS10O43665 173 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 UGDHO60701 494 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 PCSK2P16519 638 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 ALOX12P18054 663 aa21.75■■□□□ 1.07
MCF2L-201ENST00000261963 MRPS15P82914 257 aaKnown RBP21.75■■□□□ 1.07
MCF2L-201ENST00000261963 CSTF3Q12996 717 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms