RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 POLR1CO15160 346 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PRODHO43272 600 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MT-ND5P03915 603 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PVALBP20472 110 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MAXP61244 160 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 RHAGQ02094 409 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 BLMHQ13867 455 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 UBAP2LQ14157 1087 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 SLBPQ14493 270 aaKnown RBP eCLIP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF423Q2M1K9 1284 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 OGFOD2Q6N063 350 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 DNAJC14Q6Y2X3 702 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 S100A7AQ86SG5 101 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 OR8K5Q8NH50 307 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 LMO3Q8TAP4 145 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 DNAJA4Q8WW22 397 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 OIT3Q8WWZ8 545 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CST11Q9H112 138 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CCDC59Q9P031 241 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 WASF3Q9UPY6 502 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 A0A1W2PRG6 482 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TRIM43BA6NCK2 446 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 NUAK1O60285 661 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 RLN2P04090 185 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 LCN1P31025 176 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 FOXN2P32314 431 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MC1RQ01726 317 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TOR1AIP1Q5JTV8 583 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ERMP1Q7Z2K6 904 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 OR4K14Q8NGD5 310 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 OR56A3Q8NH54 315 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 XAGE5Q8WWM1 108 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 RNF31Q96EP0 1072 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ERMAPQ96PL5 475 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 HSD3B7Q9H2F3 369 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 NSUN3Q9H649 340 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MED11Q9P086 117 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF840PA6NDX5 716 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ANXA2P2A6NMY6 339 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 EMC8O43402 210 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 FARS2O95363 451 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ANXA2P07355 339 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PNMTP11086 282 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MED22Q15528 200 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 SH3PXD2AQ5TCZ1 1133 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 KCTD18Q6PI47 426 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZDHHC24Q6UX98 284 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 BPHLQ86WA6 291 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MEIOBQ8N635 442 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZSWIM3Q96MP5 696 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 FEM1AQ9BSK4 669 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 COPS4Q9BT78 406 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CSNK1G1Q9HCP0 422 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF446Q9NWS9 450 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 POMPQ9Y244 141 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF99A8MXY4 864 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 LEFTY2O00292 366 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 SSNA1O43805 119 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 HOXB2P14652 356 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 HOXB9P17482 250 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 HK1P19367 917 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 SLC25A3Q00325 362 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 HSF2Q03933 536 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ADAM15Q13444 863 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 GRM7Q14831 915 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 FASTKD3Q14CZ7 662 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 AGTRAPQ6RW13 159 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 MISPQ8IVT2 679 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 SYNPOQ8N3V7 929 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 SLC6A16Q9GZN6 736 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 SLC17A7Q9P2U7 560 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 A6NIZ1 184 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 H3BNC9 293 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 GRID2O43424 1007 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ZBTB11O95625 1053 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CFHP08603 1231 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 RAP1BP61224 184 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 RAP1AP62834 184 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 ACY1Q03154 408 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 TRIM32Q13049 653 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 CAMK1Q14012 370 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 GGTA1PQ4G0N0 100 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 LCTLQ6UWM7 567 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 LINC00299Q6ZSB3 139 aa4.18□□□□□ -1.74
VPS13C-202ENST00000261517 NANOS1Q8WY41 292 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 PIH1D1Q9NWS0 290 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 NXT1Q9UKK6 140 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 POLR2AP24928 1970 aaKnown RBP4.18□□□□□ -1.74
VPS13C-202ENST00000261517 DRGXA6NNA5 263 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 A8MT66 165 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ITPKBP27987 946 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RABL3Q5HYI8 236 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 AKAP14Q86UN6 197 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF227Q86WZ6 799 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 KLHDC8BQ8IXV7 354 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 DND1Q8IYX4 353 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 C7orf61Q8IZ16 206 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PLA2G15Q8NCC3 412 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TFGQ92734 400 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF317Q96PQ6 595 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms