RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SPPL2CQ8IUH8 684 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 ADGRF3Q8IZF5 1079 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 CLDN23Q96B33 292 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 THUMPD3Q9BV44 507 aaKnown RBP21.4■■□□□ 1.02
SIX3-201ENST00000260653 RTCAO00442 366 aaKnown RBP21.4■■□□□ 1.02
SIX3-201ENST00000260653 DCNP07585 359 aaKnown RBP21.4■■□□□ 1.02
SIX3-201ENST00000260653 EFNA1P20827 205 aaPredicted RBP21.4■■□□□ 1.02
SIX3-201ENST00000260653 CYP4F3Q08477 520 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 C1orf61Q13536 156 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 GPR18Q14330 331 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 PLCL1Q15111 1095 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 RUNDC3AQ59EK9 446 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 KIAA1614Q5VZ46 1190 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 LCN8Q6JVE9 175 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 MSANTD1Q6ZTZ1 278 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 TRIM48Q8IWZ4 208 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 STARD8Q92502 1023 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 NELL1Q92832 810 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 ZNF717Q9BY31 904 aaPredicted RBP21.4■■□□□ 1.02
SIX3-201ENST00000260653 MDC1Q14676 2089 aaKnown RBP21.4■■□□□ 1.02
SIX3-201ENST00000260653 RFXANKO14593 260 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 HAT1O14929 419 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 WNT1P04628 370 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 CD27P26842 260 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 HPCAL1P37235 193 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 ABATP80404 500 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 PQLC1Q8N2U9 271 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 C16orf78Q8WTQ4 265 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 ZUFSPQ96AP4 578 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 ECSITQ9BQ95 431 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 DUSP26Q9BV47 211 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 MCM8Q9UJA3 840 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 SNX13Q9Y5W8 968 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 SDK1Q7Z5N4 2213 aa21.39■■□□□ 1.02
SIX3-201ENST00000260653 PRSS51A0A1B0GVH4 220 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 C19orf67A6NJJ6 358 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 HTR1EP28566 365 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 SERPINB1P30740 379 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 BCL6P41182 706 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 MC1RQ01726 317 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 C1QTNF12Q5T7M4 302 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 CPTPQ5TA50 214 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 TAF8Q7Z7C8 310 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 CLECL1Q8IZS7 167 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 GJD3Q8N144 294 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 DNAJB8Q8NHS0 232 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 FAM120CQ9NX05 1096 aaKnown RBP21.39■■□□□ 1.01
SIX3-201ENST00000260653 ERVK-11Q9UQG0 969 aa21.39■■□□□ 1.01
SIX3-201ENST00000260653 TRBC2A0A5B9 178 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 NVLO15381 856 aaKnown RBP21.38■■□□□ 1.01
SIX3-201ENST00000260653 SEMA3DO95025 777 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 STATHP02808 62 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 SERPIND1P05546 499 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 CTSEP14091 401 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 TPP2P29144 1249 aaPredicted RBP21.38■■□□□ 1.01
SIX3-201ENST00000260653 CMPK1P30085 196 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 TAS2R50P59544 299 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 RPL6Q02878 288 aaKnown RBP21.38■■□□□ 1.01
SIX3-201ENST00000260653 WLSQ5T9L3 541 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 TMEM132CQ8N3T6 1108 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 OR10A6Q8NH74 314 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 MAFAQ8NHW3 353 aaPredicted RBP21.38■■□□□ 1.01
SIX3-201ENST00000260653 SLCO4A1Q96BD0 722 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 ZNF583Q96ND8 569 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 COPS7BQ9H9Q2 264 aaPredicted RBP21.38■■□□□ 1.01
SIX3-201ENST00000260653 TMEM184CQ9NVA4 438 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 MAP3K13O43283 966 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 DUOXA1Q1HG43 343 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 LRRC36Q1X8D7 754 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 ZNF385BQ569K4 471 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 CAMKMTQ7Z624 323 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 LILRA2Q8N149 483 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 CREB3L4Q8TEY5 395 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 GBP5Q96PP8 586 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 PANX1Q96RD7 426 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 CPPED1Q9BRF8 314 aaPredicted RBP21.38■■□□□ 1.01
SIX3-201ENST00000260653 MYNNQ9NPC7 610 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 SH3BP4Q9P0V3 963 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 CPNE7Q9UBL6 633 aa21.38■■□□□ 1.01
SIX3-201ENST00000260653 APOBEC3BQ9UH17 382 aaKnown RBP21.38■■□□□ 1.01
SIX3-201ENST00000260653 GRK3P35626 688 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 FXNQ16595 210 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 LPCAT4Q643R3 524 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 KBTBD2Q8IY47 623 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 UBALD2Q8IYN6 164 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 TRIM15Q9C019 465 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 REEP4Q9H6H4 257 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 AHSPQ9NZD4 102 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 NDUFS4O43181 175 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 CCNDBP1O95273 360 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 VIPP01282 170 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 JUNDP17535 347 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 HRH2P25021 359 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 PEX2P28328 305 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 BSGP35613 385 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 MUM1Q2TAK8 710 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 FAM71E1Q6IPT2 247 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 NAGSQ8N159 534 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 C10orf111Q8N326 155 aa21.37■■□□□ 1.01
SIX3-201ENST00000260653 CAMKK1Q8N5S9 505 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms