RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 BNIP3Q12983 259 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 HNRNPA0Q13151 305 aaKnown RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 MADCAM1Q13477 382 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 KCNC3Q14003 757 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 ANKDD1AQ495B1 522 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 LRIF1Q5T3J3 769 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 RELL1Q8IUW5 271 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 GALNT6Q8NCL4 622 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SMG8Q8ND04 991 aaKnown RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SCGB1C1Q8TD33 95 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 IL4I1Q96RQ9 567 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TRIB3Q96RU7 358 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TBL1XR1Q9BZK7 514 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 NMUR1Q9HB89 426 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 POPDC3Q9HBV1 291 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TAS2R3Q9NYW6 316 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 STUB1Q9UNE7 303 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TNRC6CQ9HCJ0 1690 aaKnown RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 C9JVG2 144 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 DENRO43583 198 aaKnown RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 IFNA2P01563 188 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 GKN3PP0CG01 181 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 HTR2AP28223 471 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF41P51814 821 aaPredicted RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 PGDP52209 483 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CDH11P55287 796 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 RHBDL3P58872 404 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 GRSF1Q12849 480 aaKnown RBP eCLIP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 RAB39AQ14964 217 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CTC1Q2NKJ3 1217 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TBRG1Q3YBR2 411 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SLC51AQ86UW1 340 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 ARL14Q8N4G2 192 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 DCBLD1Q8N8Z6 715 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 OR5J2Q8NH18 312 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 FNDC8Q8TC99 324 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 PSMG2Q969U7 264 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 ADAD1Q96M93 576 aaKnown RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SLC38A3Q99624 504 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 LPIN3Q9BQK8 851 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TSSK6Q9BXA6 273 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 RETREG1Q9H6L5 497 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TAS2R10Q9NYW0 307 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 DEC1Q9P2X7 70 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CAMTA1Q9Y6Y1 1673 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 BRCA1P38398 1863 aaKnown RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 A0A1W2PQ45 241 aaPredicted RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 A0A1W2PQY0 241 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 EME2A4GXA9 379 aaPredicted RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TRIM64CA6NLI5 447 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CLCA1A8K7I4 914 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 RHPN2P1A8MT19 583 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TMEM150CB9EJG8 249 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 EOMESO95936 686 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 ITGA5P08648 1049 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SELPP16109 830 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 UQCRC2P22695 453 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CASP9P55211 416 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 EMX2Q04743 252 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 ARFRP1Q13795 201 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SLBPQ14493 270 aaKnown RBP eCLIP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 NCCRP1Q6ZVX7 275 aaPredicted RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 Q8N402 240 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 FBXO15Q8NCQ5 510 aaPredicted RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 PSD4Q8NDX1 1056 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 OR14C36Q8NHC7 312 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 WFIKKN2Q8TEU8 576 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 TSPEARQ8WU66 669 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 GPR22Q99680 433 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 HEPHQ9BQS7 1158 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CCM2Q9BSQ5 444 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 PAK1IP1Q9NWT1 392 aaPredicted RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 MGAT4BQ9UQ53 548 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SCML2Q9UQR0 700 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CPQQ9Y646 472 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 MYO7BQ6PIF6 2116 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 BORCS7-ASMTA0A0B4J1R7 106 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SMIM28A0A1B0GU29 152 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 NT5C1B-RDH14C9J2C7 533 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 RNF225M0QZC1 329 aaPredicted RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 WNT9AO14904 365 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CDK14O94921 469 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CSN2P05814 226 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 GDF10P55107 478 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 AIMP2Q13155 320 aaKnown RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 PCLAFQ15004 111 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 HSDL1Q3SXM5 330 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 ASB18Q6ZVZ8 466 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 HS3ST5Q8IZT8 346 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 GOLM1Q8NBJ4 401 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 ZCCHC10Q8TBK6 192 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 FUBP3Q96I24 572 aaKnown RBP eCLIP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 PIP5K1AQ99755 562 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SLC5A7Q9GZV3 580 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SDHAF3Q9NRP4 125 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 PCDH10Q9P2E7 1040 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 KIAA1551Q9HCM1 1747 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 A0A1W2PRB8 838 aa4.66□□□□□ -1.66
RC3H1-201ENST00000258349 SAP18O00422 153 aaKnown RBP4.66□□□□□ -1.66
RC3H1-201ENST00000258349 CAPN5O15484 640 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms