RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PABPC5Q96DU9 382 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ZNF668Q96K58 619 aaPredicted RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 HOPXQ9BPY8 73 aaPredicted RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 LHPPQ9H008 270 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 EVA1BQ9NVM1 165 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 SPATA6Q9NWH7 488 aaPredicted RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PIAS3Q9Y6X2 628 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PP2D1A8MPX8 630 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 SUPT3HB4E1H0 165 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 SCGB1D1O95968 90 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 NR3C1P04150 777 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CYP11A1P05108 521 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 FGF4P08620 206 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 FCER1AP12319 257 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 IFNGR1P15260 489 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 BTF3P20290 206 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 AGTR1P30556 359 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 HCAR3P49019 387 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PITPNAQ00169 270 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 MPPED2Q15777 294 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 NTRK3Q16288 839 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 UGT8Q16880 541 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM69AQ5T7M9 428 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 KIAA1614Q5VZ46 1190 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CYP4Z1Q86W10 505 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PCNPQ8WW12 178 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 HDHD5Q9BXW7 423 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 WWTR1Q9GZV5 400 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CCDC167Q9P0B6 97 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM216Q9P0N5 145 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 COMMD3Q9UBI1 195 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ASF1AQ9Y294 204 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 MYBP10242 640 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 BMP2P12643 396 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CPN2P22792 545 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 GADD45AP24522 165 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ACAA2P42765 397 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PLA2G16P53816 162 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PRRX1P54821 245 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 MLLT10P55197 1068 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ACTA2P62736 377 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ACTG2P63267 376 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ACTC1P68032 377 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ACTA1P68133 377 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CREMQ03060 361 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CD300CQ08708 224 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 DAG1Q14118 895 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 LTB4RQ15722 352 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 BMT2Q1RMZ1 405 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PIGGQ5H8A4 983 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 RANBP10Q6VN20 620 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 DUS3LQ96G46 650 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PRMT6Q96LA8 375 aaPredicted RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PKIBQ9C010 78 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 GAL3ST2Q9H3Q3 398 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TLR8Q9NR97 1041 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM181Q9P2C4 612 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 NCDNQ9UBB6 729 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PCDHGA9Q9Y5G4 932 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 J3KRW8 73 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 UGDHO60701 494 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 APBB3O95704 486 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PTBP3O95758 552 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 MLYCDO95822 493 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 SLC25A27O95847 323 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CD44P16070 742 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CYP2B6P20813 491 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 FECHP22830 423 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ACVR2AP27037 513 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 GALNSP34059 522 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PBX1P40424 430 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 NAA10P41227 235 aaPredicted RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TAP2Q03519 686 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PTPRRQ15256 657 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 C11orf63Q6NUN7 778 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TRIM46Q7Z4K8 759 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 DEFB132Q7Z7B7 95 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 MRPL41Q8IXM3 137 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 HLA-CQ95604 372 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 BPIFA2Q96DR5 249 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 FBXL20Q96IG2 436 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 SIK2Q9H0K1 926 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 PCIF1Q9H4Z3 704 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 LINC00862A6NCI5 91 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 NPIPA5E9PKD4 350 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 NPIPA3F8WFD2 350 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TRIM77I1YAP6 450 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CLIC1O00299 241 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 NDUFS6O75380 124 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ICAM1P05362 532 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 OPCMLQ14982 345 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 ATP6AP1LQ52LC2 224 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 DACT2Q5SW24 774 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 SPATC1Q76KD6 591 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 LYSMD3Q7Z3D4 306 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 NRARPQ7Z6K4 114 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TMEM200AQ86VY9 491 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 TGIF2LXQ8IUE1 241 aa6.55□□□□□ -1.36
PDGFRA-201ENST00000257290 CLEC10AQ8IUN9 316 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms