RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 TIMMDC1Q9NPL8 285 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 PARPBPQ9NWS1 579 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 PIRO00625 290 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 ABCA11PQ4W5N1 156 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 EPGNQ6UW88 154 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 PIK3R3Q92569 461 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 CNDP2Q96KP4 475 aaKnown RBP18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 PLD2O14939 933 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 BNIP3Q12983 259 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 SLC15A3Q8IY34 581 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 SPERTQ8NA61 448 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF296Q8WUU4 475 aaPredicted RBP18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 LYARQ9NX58 379 aaKnown RBP18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 LOC100130705A0A1B0GUX0 176 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 TTC34A8MYJ7 566 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 C11orf98E9PRG8 122 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 PMM2O15305 246 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 DDX1Q92499 740 aaKnown RBP18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 LRCH3Q96II8 777 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 FEZF1A0PJY2 475 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 IFI30P13284 250 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 HTRA3P83110 453 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF678Q5SXM1 525 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 DPY19L3Q6ZPD9 716 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF611Q8N823 705 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 ALPK1Q96QP1 1244 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 RC3H2Q9HBD1 1191 aaKnown RBP18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 ZIM2Q9NZV7 527 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 ACOX3O15254 700 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 LATO43561 262 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 FHP07954 510 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF30P17039 623 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 BLMHQ13867 455 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 PYURFQ96I23 114 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 NLE1Q9NVX2 485 aaPredicted RBP18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 NCDNQ9UBB6 729 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 Q9Y3F1 56 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 RBM47A0AV96 593 aaKnown RBP18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 IL33O95760 270 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 KLK3P07288 261 aaPredicted RBP18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 NPAS3Q8IXF0 933 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 OR10T2Q8NGX3 314 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 IRF2BPLQ9H1B7 796 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF639Q9UID6 485 aa18.09■□□□□ 0.49
SMARCC1-201ENST00000254480 OAS1P00973 400 aaKnown RBP18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 NR0B1P51843 470 aaKnown RBP18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF234Q14588 700 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 RASGEF1AQ8N9B8 481 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 TSSK6Q9BXA6 273 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 KCNH6Q9H252 994 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 LIN28AQ9H9Z2 209 aaKnown RBP18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 C12orf4Q9NQ89 552 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 SDHAF3Q9NRP4 125 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 THUMPD1Q9NXG2 353 aaKnown RBP18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 J3QRK9 145 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 HK1P19367 917 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 TPTEP56180 551 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 TNFAIP8L3Q5GJ75 292 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 DTX3Q8N9I9 347 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 OR2L8Q8NGY9 312 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 C16orf70Q9BSU1 422 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 UCK2Q9BZX2 261 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 LTN1O94822 1766 aa18.08■□□□□ 0.49
SMARCC1-201ENST00000254480 MAZP56270 477 aaKnown RBP18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 DECR1Q16698 335 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 FAM180BQ6P0A1 224 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 ZNF782Q6ZMW2 699 aaPredicted RBP18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 C2CD4AQ8NCU7 369 aaPredicted RBP18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 TAMM41Q96BW9 452 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 BEX2Q9BXY8 128 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 MEAF6Q9HAF1 191 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 BEX1Q9HBH7 125 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 ZBTB26Q9HCK0 441 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 PCP4L1A6NKN8 68 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 PDCD5O14737 125 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 SCNN1AP37088 669 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 KLHDC7BQ96G42 594 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 CAMK1GQ96NX5 476 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 TCHHQ07283 1943 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 A0A0U1RQS6 177 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 MEIS3P2A8K0S8 358 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 LRP8Q14114 963 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 NADK2Q4G0N4 442 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 TP53INP2Q8IXH6 220 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 BADQ92934 168 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 SIGLEC10Q96LC7 697 aa18.08■□□□□ 0.48
SMARCC1-201ENST00000254480 SAGE2PA6NJ88 616 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 AQP12BA6NM10 295 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 CBSLP0DN79 551 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 BMP8BP34820 402 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 CBSP35520 551 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 BMP8AQ7Z5Y6 402 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 SLC9B2Q86UD5 537 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 GKN2Q86XP6 184 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 AQP12AQ8IXF9 295 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 OR8H3Q8N146 312 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 ZBTB8BQ8NAP8 495 aaPredicted RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 SMG8Q8ND04 991 aaKnown RBP18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 OR6N1Q8NGY5 312 aa18.07■□□□□ 0.48
SMARCC1-201ENST00000254480 KIAA1191Q96A73 305 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms