RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 PEX11GQ96HA9 241 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 LPAR4Q99677 370 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 SEC14L3Q9UDX4 400 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 PCDHGB6Q9Y5F9 930 aa19.85■□□□□ 0.77
NEDD8-201ENST00000250495 TRBC2A0A5B9 178 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 NDUFS4O43181 175 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 UNC5CO95185 931 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 ENO2P09104 434 aaPredicted RBP19.84■□□□□ 0.77
NEDD8-201ENST00000250495 CSHL1Q14406 222 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 MORF4L2Q15014 288 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 ZXDCQ2QGD7 858 aaPredicted RBP19.84■□□□□ 0.77
NEDD8-201ENST00000250495 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.84■□□□□ 0.771e-17■■□□□ 12.3
NEDD8-201ENST00000250495 ZNF766Q5HY98 468 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 FAM45BPQ6NSW5 357 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 STRA8Q7Z7C7 330 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 AFAP1L2Q8N4X5 818 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 FAM45AQ8TCE6 357 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 FBXL8Q96CD0 374 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 PDLIM5Q96HC4 596 aaKnown RBP19.84■□□□□ 0.77
NEDD8-201ENST00000250495 MMP25Q9NPA2 562 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 COPG2Q9UBF2 871 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 ENTPD4Q9Y227 616 aa19.84■□□□□ 0.77
NEDD8-201ENST00000250495 MAGEB17A8MXT2 336 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 TCP1P17987 556 aaKnown RBP19.83■□□□□ 0.77
NEDD8-201ENST00000250495 ALOX12P18054 663 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 IVDP26440 423 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 ELK3P41970 407 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 MEF2AQ02078 507 aaPredicted RBP19.83■□□□□ 0.77
NEDD8-201ENST00000250495 RHAGQ02094 409 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 RBPJQ06330 500 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 RGS1Q08116 209 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 ABRAXAS2Q15018 415 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 SFT2D3Q587I9 215 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 SP5Q6BEB4 398 aaPredicted RBP19.83■□□□□ 0.77
NEDD8-201ENST00000250495 PAPD4Q6PIY7 484 aaKnown RBP19.83■□□□□ 0.77
NEDD8-201ENST00000250495 SYDE1Q6ZW31 735 aaPredicted RBP19.83■□□□□ 0.77
NEDD8-201ENST00000250495 BEST3Q8N1M1 668 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 TBC1D20Q96BZ9 403 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 LRRC39Q96DD0 335 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 UTP23Q9BRU9 249 aaKnown RBP19.83■□□□□ 0.77
NEDD8-201ENST00000250495 KCNF1Q9H3M0 494 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 LANCL2Q9NS86 450 aa19.83■□□□□ 0.77
NEDD8-201ENST00000250495 SUCOQ9UBS9 1254 aaKnown RBP19.83■□□□□ 0.77
NEDD8-201ENST00000250495 TRGV8A0A0C4DH27 118 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 ZNF860A6NHJ4 632 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 TTI1O43156 1089 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 HNRNPRO43390 633 aaKnown RBP19.82■□□□□ 0.76
NEDD8-201ENST00000250495 GALR3O60755 368 aaPredicted RBP19.82■□□□□ 0.76
NEDD8-201ENST00000250495 CDC123O75794 336 aaPredicted RBP19.82■□□□□ 0.76
NEDD8-201ENST00000250495 GUCA1CO95843 209 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 SERPIND1P05546 499 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 FHP07954 510 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 JAK1P23458 1154 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 MST1P26927 711 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 OR4D2P58180 307 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 HP1BP3Q5SSJ5 553 aaPredicted RBP19.82■□□□□ 0.76
NEDD8-201ENST00000250495 FCRLBQ6BAA4 426 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 ABHD13Q7L211 337 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 TICAM1Q8IUC6 712 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 CRLF3Q8IUI8 442 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 ZNF740Q8NDX6 193 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 OR5T3Q8NGG3 340 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 SLC5A11Q8WWX8 675 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 CFAP36Q96G28 342 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 RUNDC3BQ96NL0 473 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 OR4K3Q96R72 315 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 CLK4Q9HAZ1 481 aaKnown RBP19.82■□□□□ 0.76
NEDD8-201ENST00000250495 ZFP69BQ9UJL9 534 aa19.82■□□□□ 0.76
NEDD8-201ENST00000250495 URADA6NGE7 173 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 ENO4A6NNW6 628 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 CDK2AP1O14519 115 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 CHST10O43529 356 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 AHRP35869 848 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 TAS2R50P59544 299 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 TUBA3CQ13748 450 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 USP10Q14694 798 aaKnown RBP19.81■□□□□ 0.76
NEDD8-201ENST00000250495 DEFB134Q4QY38 66 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 CATSPEREQ5SY80 951 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 MTFR2Q6P444 385 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 TUBA3EQ6PEY2 450 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 SLC5A8Q8N695 610 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 HORMAD2Q8N7B1 307 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 NT5CQ8TCD5 201 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 NEIL2Q969S2 332 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 MOCOSQ96EN8 888 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 OLFM1Q99784 485 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 RBCK1Q9BYM8 510 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 PLAC1Q9HBJ0 212 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 SLC17A6Q9P2U8 582 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 CHMP2BQ9UQN3 213 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 DYRK1BQ9Y463 629 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 TEX264Q9Y6I9 313 aa19.81■□□□□ 0.76
NEDD8-201ENST00000250495 MYO9AB2RTY4 2548 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 CELSR2Q9HCU4 2923 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 PRSS44E7EML9 344 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 MLYCDO95822 493 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 CD46P15529 392 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 CD96P40200 585 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 SCTRP47872 440 aa19.8■□□□□ 0.76
NEDD8-201ENST00000250495 PGGT1BP53609 377 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms