RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 LCMT2O60294 686 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 PRMT3O60678 531 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 HNRNPCL1O60812 293 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 SEC22BO75396 215 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ATP5HO75947 161 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 CDK4P11802 303 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 CD59P13987 128 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 NCF2P19878 526 aaPredicted RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 LSSP48449 732 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 MNAT1P51948 309 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 C21orf58P58505 322 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 RPS13P62277 151 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 MEF2AQ02078 507 aaPredicted RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 RGS1Q08116 209 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 TRA2AQ13595 282 aaKnown RBP eCLIP12.37□□□□□ -0.43
LSM8-201ENST00000249299 CCDC6Q16204 474 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 RFTN2Q52LD8 501 aaPredicted RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 PDCD4Q53EL6 469 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 SCIMPQ6UWF3 145 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ASPGQ86U10 573 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 METTL4Q8N3J2 472 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 DNAJC22Q8N4W6 341 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 FITM2Q8N6M3 262 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 GLB1L3Q8NCI6 653 aaPredicted RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 OR2I1PQ8NGU4 316 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 RHBDD1Q8TEB9 315 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 SLC13A3Q8WWT9 602 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 KLHL6Q8WZ60 621 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 STARD8Q92502 1023 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 RERGQ96A58 199 aaPredicted RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 RGMAQ96B86 450 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ERP27Q96DN0 273 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 MTFMTQ96DP5 389 aaKnown RBP12.37□□□□□ -0.43
LSM8-201ENST00000249299 CMTM5Q96DZ9 223 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 SLC41A2Q96JW4 573 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 PPP1R36Q96LQ0 422 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ZNF285Q96NJ3 590 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 MAP3K3Q99759 626 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 NLNQ9BYT8 704 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 SLC6A16Q9GZN6 736 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 LRRN3Q9H3W5 708 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 SMOC1Q9H4F8 434 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 PDE7BQ9NP56 450 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 ZIM2Q9NZV7 527 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 FTSJ1Q9UET6 329 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 GPR45Q9Y5Y3 372 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 PTGDR2Q9Y5Y4 395 aa12.37□□□□□ -0.43
LSM8-201ENST00000249299 TDRD6O60522 2096 aaKnown RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 ARID1BQ8NFD5 2236 aaPredicted RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 A0A088AWK7 358 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 FEZF1A0PJY2 475 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 CAPN14A8MX76 684 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 CTSVO60911 334 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 ST6GAL1P15907 406 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 ZNF10P21506 573 aaPredicted RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 TGM1P22735 817 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 ASMTP46597 345 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 TRA2BP62995 288 aaKnown RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 HSD11B2P80365 405 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 SPEM2Q0P670 501 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 DDX39BQ13838 428 aaKnown RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 HERC3Q15034 1050 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 RPS6KA2Q15349 733 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 MAPRE2Q15555 327 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 TCTE1Q5JU00 501 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 NOXRED1Q6NXP6 359 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 TRIM73Q86UV7 250 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 MIER2Q8N344 545 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 IFI44Q8TCB0 444 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 CNDP2Q96KP4 475 aaKnown RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 TGM7Q96PF1 710 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 CCDC3Q9BQI4 270 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 TBCDQ9BTW9 1192 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 CCDC106Q9BWC9 280 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 REXO4Q9GZR2 422 aaKnown RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 ZNF768Q9H5H4 540 aaKnown RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 CLK4Q9HAZ1 481 aaKnown RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 MCM8Q9UJA3 840 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 PLCL2Q9UPR0 1127 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 COPG1Q9Y678 874 aaKnown RBP12.36□□□□□ -0.43
LSM8-201ENST00000249299 CAPN7Q9Y6W3 813 aa12.36□□□□□ -0.43
LSM8-201ENST00000249299 COL5A1P20908 1838 aaPredicted RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 SLC9B1P1A6NJY1 282 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 PSMD12O00232 456 aaPredicted RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 NTN3O00634 580 aaPredicted RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 SCELO95171 688 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 TBX6O95947 436 aaPredicted RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 TGFB1P01137 390 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 ALDOCP09972 364 aaKnown RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 BCKDHAP12694 445 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 DDX5P17844 614 aaKnown RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 JAK1P23458 1154 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 RPL3P39023 403 aaKnown RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 LIMK1P53667 647 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 RPL38P63173 70 aaKnown RBP12.35□□□□□ -0.43
LSM8-201ENST00000249299 SKP1P63208 163 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 E2F1Q01094 437 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 CFHR1Q03591 330 aa12.35□□□□□ -0.43
LSM8-201ENST00000249299 SF3A3Q12874 501 aaKnown RBP eCLIP12.35□□□□□ -0.43
LSM8-201ENST00000249299 SF3A2Q15428 464 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms