RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TIA1P31483 386 aaKnown RBP eCLIP20.84■□□□□ 0.932e-9■■■■■ 31.5
SH2D3A-201ENST00000245908 NPRL3Q12980 569 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 ZNF846Q147U1 533 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 SMN1Q16637 294 aaKnown RBP20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 KIAA0907Q7Z7F0 614 aaPredicted RBP20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 VMP1Q96GC9 406 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 MRGPRX3Q96LB0 322 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 VPS4AQ9UN37 437 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 PADI2Q9Y2J8 665 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 TMEM98Q9Y2Y6 226 aa20.84■□□□□ 0.93
SH2D3A-201ENST00000245908 TTC34A8MYJ7 566 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 TMEM229AB2RXF0 380 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 CLDN25C9JDP6 229 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 CTSLP07711 333 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 IDUAP35475 653 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 KRT20P35900 424 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 WDR5P61964 334 aaKnown RBP20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 LRRC74AQ0VAA2 488 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 CLCA4Q14CN2 919 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 PROX2Q3B8N5 592 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 RHNO1Q9BSD3 238 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 SCHIP1Q9P0W5 487 aaPredicted RBP20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 ZNF282Q9UDV7 671 aaPredicted RBP20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 TSC22D4Q9Y3Q8 395 aa20.83■□□□□ 0.93
SH2D3A-201ENST00000245908 MGAT4DA6NG13 374 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 RNASET2O00584 256 aaKnown RBP20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 KPNA4O00629 521 aaPredicted RBP20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 POLR2EP19388 210 aaKnown RBP20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 PNLIPRP1P54315 467 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 RPP38P78345 283 aaKnown RBP20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 CAMK2GQ13555 558 aaPredicted RBP20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 ADPRMQ3LIE5 342 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 SLCO4C1Q6ZQN7 724 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 PRSS48Q7RTY5 328 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 SLCO6A1Q86UG4 719 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 P2RY8Q86VZ1 359 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 CYB5D2Q8WUJ1 264 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 IPCEF1Q8WWN9 437 aaPredicted RBP20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 CXorf40BQ96DE9 158 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 TCEAL4Q96EI5 215 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 ZNF300Q96RE9 604 aaPredicted RBP20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 SIGLEC11Q96RL6 698 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 DOHHQ9BU89 302 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 GABARAPL3Q9BY60 117 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 ACOT13Q9NPJ3 140 aa20.83■□□□□ 0.92
SH2D3A-201ENST00000245908 SH3BGRLO75368 114 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 WBP4O75554 376 aaKnown RBP20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 ADH1AP07327 375 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 RPS13P62277 151 aaKnown RBP20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 TMEM115Q12893 351 aaPredicted RBP20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 TEAD4Q15561 434 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 CCDC81Q6ZN84 652 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 TMCO5AQ8N6Q1 288 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 C11orf65Q8NCR3 313 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 GPR156Q8NFN8 814 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 FOPNLQ96NB1 174 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 LINC00597Q9H2U6 94 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 HMG20AQ9NP66 347 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 AKIP1Q9NQ31 210 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 IL36AQ9UHA7 158 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 ATP6V1HQ9UI12 483 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 EXO1Q9UQ84 846 aaKnown RBP20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 PCDHGB3Q9Y5G1 929 aa20.82■□□□□ 0.92
SH2D3A-201ENST00000245908 PCDH7O60245 1069 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 GCM2O75603 506 aaPredicted RBP20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 CXCL14O95715 111 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 DDX6P26196 483 aaKnown RBP eCLIP20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 ITGADQ13349 1161 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 CYP2A13Q16696 494 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 ZNF805Q5CZA5 627 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 DEPDC1Q5TB30 811 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 MED27Q6P2C8 311 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 NAGSQ8N159 534 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 OR4A15Q8NGL6 344 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 SORCS1Q8WY21 1168 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 MAL2Q969L2 176 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 NEIL2Q969S2 332 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 HRASLS5Q96KN8 279 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 YME1L1Q96TA2 773 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 BHLHE41Q9C0J9 482 aaPredicted RBP20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 KCNE2Q9Y6J6 123 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 GNG14A0A1W2PPG7 69 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 FADS2O95864 444 aaKnown RBP20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 XPAP23025 273 aaPredicted RBP20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 PSMB9P28065 219 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 MMP12P39900 470 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 ST13P50502 369 aaKnown RBP20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 TEAD2Q15562 447 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 LY6G5CQ5SRR4 150 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 TSEN54Q7Z6J9 526 aaKnown RBP20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 FAM124AQ86V42 546 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 NDNFQ8TB73 568 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 APH1BQ8WW43 257 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 WDR12Q9GZL7 423 aaKnown RBP20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 TDP1Q9NUW8 608 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 TMEM39AQ9NV64 488 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 SH3BP4Q9P0V3 963 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 DKK3Q9UBP4 350 aa20.81■□□□□ 0.92
SH2D3A-201ENST00000245908 PCM1Q15154 2024 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms