RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZNF300Q96RE9 604 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-202ENST00000244303 EPYCQ99645 322 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 HEPHQ9BQS7 1158 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 AKIP1Q9NQ31 210 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 KIAA1549LQ6ZVL6 1849 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 GNG14A0A1W2PPG7 69 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 MGAT4DA6NG13 374 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 TMEM229AB2RXF0 380 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 SUV39H1O43463 412 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ADAM23O75077 832 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 MOSPD3O75425 235 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 CATP04040 527 aaKnown RBP13.85□□□□□ -0.19
HIF3A-202ENST00000244303 EIF2B2P49770 351 aaKnown RBP13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ST13P50502 369 aaKnown RBP13.85□□□□□ -0.19
HIF3A-202ENST00000244303 KCNC4Q03721 635 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 PROX2Q3B8N5 592 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 POM121L1PQ3SYA9 428 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 PLPP4Q5VZY2 271 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ENTHD1Q8IYW4 607 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 NAGSQ8N159 534 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 SVOPQ8N4V2 548 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 VPS37AQ8NEZ2 397 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 CYB5D2Q8WUJ1 264 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 BTN2A2Q8WVV5 523 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 APH1BQ8WW43 257 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 SORCS1Q8WY21 1168 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 VMP1Q96GC9 406 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 METTL2AQ96IZ6 378 aaKnown RBP13.85□□□□□ -0.19
HIF3A-202ENST00000244303 PKP4Q99569 1192 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 PITX2Q99697 317 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ZSCAN5AQ9BUG6 496 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 SPATA9Q9BWV2 254 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ALOXE3Q9BYJ1 711 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 RUBCNLQ9H714 662 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 CCNB1IP1Q9NPC3 277 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ADPRHL2Q9NX46 363 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 SH3BP4Q9P0V3 963 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 ZNF451Q9Y4E5 1061 aa13.85□□□□□ -0.19
HIF3A-202ENST00000244303 LRRK1Q38SD2 2015 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TTC34A8MYJ7 566 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 NPC1O15118 1278 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 GCM2O75603 506 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 RFPL2O75678 378 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 NADKO95544 446 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TYRP14679 529 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TIMP2P16035 220 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 PBLDP30039 288 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 HPCAL1P37235 193 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 GSSP48637 474 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 CASP9P55211 416 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 NCS1P62166 190 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 RPS13P62277 151 aaKnown RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TMEM236Q5W0B7 351 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 Q6ZPB1 254 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 AHSA2Q719I0 299 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 PRSS48Q7RTY5 328 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 CAMKMTQ7Z624 323 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 MRPL43Q8N983 215 aaKnown RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 OR4A15Q8NGL6 344 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 OR56A3Q8NH54 315 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 CHTF18Q8WVB6 975 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 NEIL2Q969S2 332 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TAMM41Q96BW9 452 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TIFAQ96CG3 184 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 SAMD11Q96NU1 681 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 WDR12Q9GZL7 423 aaKnown RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 LINC00597Q9H2U6 94 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 MTG2Q9H4K7 406 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 RAPGEFL1Q9UHV5 662 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 CORO2BQ9UQ03 480 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 PCDHGA6Q9Y5G7 932 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 IRAK3Q9Y616 596 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 ALPK3Q96L96 1907 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 MTCL1Q9Y4B5 1905 aaKnown RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 SLC5A10A0PJK1 596 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 E9PQ18 207 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 PCDH7O60245 1069 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 ATG13O75143 517 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 CTSLP07711 333 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 PPIBP23284 216 aaKnown RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 PDHA2P29803 388 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TIA1P31483 386 aaKnown RBP eCLIP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 EPHA5P54756 1037 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 MVKQ03426 396 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 DGUOKQ16854 277 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 ZNF284Q2VY69 593 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 ZNF385BQ569K4 471 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 SPIN4Q56A73 249 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 ANXA8L1Q5VT79 327 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 GPR153Q6NV75 609 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 ANGPTL8Q6UXH0 198 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TSEN54Q7Z6J9 526 aaKnown RBP13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TMPRSS11BQ86T26 416 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 FAM124AQ86V42 546 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 IRF7Q92985 503 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 COQ8BQ96D53 544 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 KCNC2Q96PR1 638 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 FAM83CQ9BQN1 747 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 DOHHQ9BU89 302 aa13.84□□□□□ -0.19
HIF3A-202ENST00000244303 TDP1Q9NUW8 608 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms