RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 CYS1Q717R9 158 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 HORMAD2Q8N7B1 307 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 BCORP1Q8N888 145 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 AMER3Q8N944 861 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 MFSD9Q8NBP5 474 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 TTLQ8NG68 377 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 OR4K1Q8NGD4 311 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 C5orf34Q96MH7 638 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 NDNQ99608 321 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 AIF1LQ9BQI0 150 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 TRIM56Q9BRZ2 755 aaKnown RBP12.06□□□□□ -0.48
PDZD11-201ENST00000239666 PITHD1Q9GZP4 211 aaPredicted RBP12.06□□□□□ -0.48
PDZD11-201ENST00000239666 ASF1BQ9NVP2 202 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 SLC5A6Q9Y289 635 aa12.06□□□□□ -0.48
PDZD11-201ENST00000239666 GPC6Q9Y625 555 aaPredicted RBP12.06□□□□□ -0.48
PDZD11-201ENST00000239666 CNTRLQ7Z7A1 2325 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 A0A088AWK7 358 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 A0A1W2PNR3 127 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 TRBC2A0A5B9 178 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 FOXS1O43638 330 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 GSTA2P09210 222 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 COX6A1P12074 109 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 ZNF10P21506 573 aaPredicted RBP12.05□□□□□ -0.48
PDZD11-201ENST00000239666 ITGA8P53708 1063 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 MINDY4Q4G0A6 757 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 CDKL4Q5MAI5 379 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 MFSD4BQ5TF39 518 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 FRA10AC1Q70Z53 315 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 ADAMTSL2Q86TH1 951 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 PRSS58Q8IYP2 241 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 AGGF1Q8N302 714 aaeCLIP12.05□□□□□ -0.48
PDZD11-201ENST00000239666 TCAIMQ8N3R3 496 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 OR56A3Q8NH54 315 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 OR51Q1Q8NH59 317 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 DNAJB8Q8NHS0 232 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 PYROXD1Q8WU10 500 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 FAR1Q8WVX9 515 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 ALKBH8Q96BT7 664 aaKnown RBP12.05□□□□□ -0.48
PDZD11-201ENST00000239666 CFAP36Q96G28 342 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 CNDP1Q96KN2 507 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 CAPZA3Q96KX2 299 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 ZNF354BQ96LW1 612 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 CYTH2Q99418 400 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 ATG10Q9H0Y0 220 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 CNOT10Q9H9A5 744 aaKnown RBP12.05□□□□□ -0.48
PDZD11-201ENST00000239666 CHMP2BQ9UQN3 213 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 PCDHGB6Q9Y5F9 930 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 SHANK1Q9Y566 2161 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 HECTD1Q9ULT8 2610 aa12.05□□□□□ -0.48
PDZD11-201ENST00000239666 A0A1B0GUH1 482 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 BLACEA4D250 179 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 KRT87PA6NCN2 255 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 E7ESA3 106 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 OR1F1O43749 312 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 GNAZP19086 355 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 GABRB3P28472 473 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 XCR1P46094 333 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 CDKN2DP55273 166 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 TAS2R50P59544 299 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 POU4F1Q01851 419 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 ACTN3Q08043 901 aaPredicted RBP12.04□□□□□ -0.48
PDZD11-201ENST00000239666 PDIA2Q13087 525 aaKnown RBP12.04□□□□□ -0.48
PDZD11-201ENST00000239666 EIF2S3LQ2VIR3 472 aaKnown RBP12.04□□□□□ -0.48
PDZD11-201ENST00000239666 PLAG1Q6DJT9 500 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 CAPN12Q6ZSI9 719 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 CPEB2Q7Z5Q1 589 aaKnown RBP12.04□□□□□ -0.48
PDZD11-201ENST00000239666 CUZD1Q86UP6 607 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 ARHGEF39Q8N4T4 335 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 PLPP5Q8NEB5 264 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 OR9A4Q8NGU2 314 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 M1APQ8TC57 530 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 SLC5A11Q8WWX8 675 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 LPAR4Q99677 370 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.04□□□□□ -0.48
PDZD11-201ENST00000239666 RAB17Q9H0T7 212 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 PELI2Q9HAT8 420 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 STMN3Q9NZ72 180 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 MOCS1Q9NZB8 636 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 LUZP4Q9P127 313 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 WHRNQ9P202 907 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 PTGFRNQ9P2B2 879 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 ZFP69BQ9UJL9 534 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 ADAMTS6Q9UKP5 1117 aa12.04□□□□□ -0.48
PDZD11-201ENST00000239666 UTP11Q9Y3A2 253 aaKnown RBP12.04□□□□□ -0.48
PDZD11-201ENST00000239666 PSMD12O00232 456 aaPredicted RBP12.03□□□□□ -0.48
PDZD11-201ENST00000239666 CDH1P12830 882 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 ZNF37AP17032 561 aaPredicted RBP12.03□□□□□ -0.48
PDZD11-201ENST00000239666 ALOX12P18054 663 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 UQCRFS1P47985 274 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 TNFSF10P50591 281 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 STXBP1P61764 594 aaKnown RBP12.03□□□□□ -0.48
PDZD11-201ENST00000239666 YBX1P67809 324 aaKnown RBP12.03□□□□□ -0.48
PDZD11-201ENST00000239666 RCN2Q14257 317 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 RBM20Q5T481 1227 aaKnown RBP12.03□□□□□ -0.48
PDZD11-201ENST00000239666 MTFR2Q6P444 385 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 LINC00696Q6ZRV3 163 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 CEP128Q6ZU80 1094 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 VN1R4Q7Z5H5 301 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 CCDC91Q7Z6B0 441 aa12.03□□□□□ -0.48
PDZD11-201ENST00000239666 ZC3H7AQ8IWR0 971 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms