RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 HMX3A6NHT5 357 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 SLC38A8A6NNN8 435 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 PAPSS1O43252 624 aaPredicted RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 IL7RP16871 459 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ACVR2AP27037 513 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 TAS2R39P59534 338 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 C1orf61Q13536 156 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 TEAD2Q15562 447 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ABHD13Q7L211 337 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 TMC8Q8IU68 726 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 MFSD2AQ8NA29 543 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 CNTNAP3BQ96NU0 1288 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 UCK2Q9BZX2 261 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 SERTAD3Q9UJW9 196 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 PROS1P07225 676 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 PET100P0DJ07 73 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 RAB5CP51148 216 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 MTPNP58546 118 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 TXNDC8Q6A555 127 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ZNF773Q6PK81 442 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 SLC44A3Q8N4M1 653 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 JAGN1Q8N5M9 183 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 OR5K1Q8NHB7 308 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 FNDC8Q8TC99 324 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 VCPIP1Q96JH7 1222 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 TLR9Q9NR96 1032 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ACTR3BQ9P1U1 418 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 TRPS1Q9UHF7 1281 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 CPS1P31327 1500 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 GMDSO60547 372 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 CRHR1P34998 444 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 SERPINF1P36955 418 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 MARCKSL1P49006 195 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 CRYBB1P53674 252 aaPredicted RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 PPP1R8Q12972 351 aaKnown RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 KANK2Q63ZY3 851 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ETFRF1Q6IPR1 90 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 TMEM192Q8IY95 271 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 PRELID2Q8N945 189 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ANKRD52Q8NB46 1076 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 ARL5BQ96KC2 179 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 HBEGFQ99075 208 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 PBDC1Q9BVG4 233 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 TLL2Q9Y6L7 1015 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 LPOP22079 712 aaPredicted RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 HCAR3P49019 387 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 HNRNPA0Q13151 305 aaKnown RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 MFSD13AQ14CX5 517 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 RAET1LQ5VY80 246 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 THEM6Q8WUY1 208 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 OR14A2Q96R54 314 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 LRRC4CQ9HCJ2 640 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 PCTPQ9UKL6 214 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 CPQQ9Y646 472 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 CACNA1SQ13698 1873 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 PNPLA7Q6ZV29 1317 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 GPR75-ASB3A0A0A6YYF3 556 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 KLF8O95600 359 aaPredicted RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 POU4F3Q15319 338 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 C15orf52Q6ZUT6 534 aaKnown RBP10.79□□□□□ -0.68
MSH6-201ENST00000234420 ADAMTSL2Q86TH1 951 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 MAPK15Q8TD08 544 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 NUS1Q96E22 293 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 GNB4Q9HAV0 340 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 HIF1ANQ9NWT6 349 aa10.79□□□□□ -0.68
MSH6-201ENST00000234420 GLYATL1P3A0A0U1RQE8 302 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 B4GALT5O43286 388 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 TRUB2O95900 331 aaKnown RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 GTF2F2P13984 249 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ADH6P28332 368 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 CAMLGP49069 296 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 IDH3AP50213 366 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 NCS1P62166 190 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 TMCO2Q7Z6W1 182 aaPredicted RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 ZNF283Q8N7M2 679 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 OR7D4Q8NG98 312 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 S100A16Q96FQ6 103 aaKnown RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 CD320Q9NPF0 282 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ACTR10Q9NZ32 417 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 BACE2Q9Y5Z0 518 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 A0A1B0GVT2 93 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 HCKP08631 526 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ENDOUP21128 410 aaKnown RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 PPM1JQ5JR12 505 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ANKRD54Q6NXT1 300 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 PXYLP1Q8TE99 480 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 FUBP3Q96I24 572 aaKnown RBP eCLIP10.78□□□□□ -0.68
MSH6-201ENST00000234420 NECAB3Q96P71 396 aaPredicted RBP10.78□□□□□ -0.68
MSH6-201ENST00000234420 BTBD1Q9H0C5 482 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 OR2AG1Q9H205 316 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 HAO2Q9NYQ3 351 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 FKBPLQ9UIM3 349 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 FER1L6Q2WGJ9 1857 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 ZNF541Q9H0D2 1346 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 AGPAT2O15120 278 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 RAP2AP10114 183 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 XKP51811 444 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 FADDQ13158 208 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 SLC9B1Q4ZJI4 515 aa10.78□□□□□ -0.68
MSH6-201ENST00000234420 SBK1Q52WX2 424 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms