RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PFKFB4Q16877 469 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 BEND4Q6ZU67 534 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 SMIM5Q71RC9 77 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 FAM126BQ8IXS8 530 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 PYROXD2Q8N2H3 581 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 POP5Q969H6 163 aaKnown RBP12.58□□□□□ -0.4
MSH2-201ENST00000233146 ZBTB18Q99592 522 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 FAM126AQ9BYI3 521 aaPredicted RBP12.58□□□□□ -0.4
MSH2-201ENST00000233146 C8orf33Q9H7E9 229 aaPredicted RBP12.58□□□□□ -0.4
MSH2-201ENST00000233146 PFDN2Q9UHV9 154 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 STUB1Q9UNE7 303 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
MSH2-201ENST00000233146 TMEM82A0PJX8 343 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 LRRC14BA6NHZ5 514 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 SIX3O95343 332 aaPredicted RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 APOC3P02656 99 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 CXCL3P19876 107 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 XKR7Q5GH72 579 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 CD276Q5ZPR3 534 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 Q6ZPB1 254 aaPredicted RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 RAB44Q7Z6P3 723 aaPredicted RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 FAM217AQ8IXS0 508 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 EIF4E3Q8N5X7 224 aaKnown RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 OR10Q1Q8NGQ4 319 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 SETD7Q8WTS6 366 aaKnown RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 SFT2D1Q8WV19 159 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 PGAP3Q96FM1 320 aaPredicted RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 SCMH1Q96GD3 660 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 NSUN5Q96P11 429 aaKnown RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 THUMPD3Q9BV44 507 aaKnown RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 EQTNQ9NQ60 294 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 DNAJC11Q9NVH1 559 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 FNDC1Q4ZHG4 1894 aaPredicted RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 A0A1B0GTL3 188 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 EFCAB7A8K855 629 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 SCG5P05408 212 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 HAPLN1P10915 354 aaPredicted RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 DNASE1P24855 282 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 ITGB8P26012 769 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 HNMTP50135 292 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 CYP4F8P98187 520 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 FGL2Q14314 439 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 DUOXA2Q1HG44 320 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 SPDYE7PQ495Y7 208 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 ZNF648Q5T619 568 aaPredicted RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 PKN3Q6P5Z2 889 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 CLDN22Q8N7P3 220 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 UXS1Q8NBZ7 420 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 MCPH1Q8NEM0 835 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 OR1M1Q8NGA1 313 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 H2AFJQ9BTM1 129 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 BCO2Q9BYV7 579 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 RAD18Q9NS91 495 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 SH3BP4Q9P0V3 963 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 SGK494L7N484 410 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 TNFSF9P41273 254 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 CRKLP46109 303 aaKnown RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 PREPP48147 710 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 TKFCQ3LXA3 575 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 MOB2Q70IA6 237 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 RAB11FIP2Q7L804 512 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 NLRC3Q7RTR2 1065 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 DNAJC5GQ8N7S2 189 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 EDARADDQ8WWZ3 215 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 C11orf84Q9BUA3 381 aaPredicted RBP12.57□□□□□ -0.4
MSH2-201ENST00000233146 PTPRHQ9HD43 1115 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 SEC14L4Q9UDX3 406 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 OTOFQ9HC10 1997 aa12.57□□□□□ -0.4
MSH2-201ENST00000233146 SFTPCP11686 197 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 GABRB1P18505 474 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 PTAFRP25105 342 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 ARL4AP40617 200 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 APOBEC3HQ6NTF7 200 aaKnown RBP12.56□□□□□ -0.4
MSH2-201ENST00000233146 GPR153Q6NV75 609 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 ASPGQ86U10 573 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 TP53INP2Q8IXH6 220 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 PTGR2Q8N8N7 351 aaPredicted RBP12.56□□□□□ -0.4
MSH2-201ENST00000233146 C12orf29Q8N999 325 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 CENPIQ92674 756 aaPredicted RBP12.56□□□□□ -0.4
MSH2-201ENST00000233146 TCEAL3Q969E4 200 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 RAD51AP1Q96B01 352 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 TMEM176AQ96HP8 235 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 GAL3ST1Q99999 423 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 POLR3FQ9H1D9 316 aaPredicted RBP12.56□□□□□ -0.4
MSH2-201ENST00000233146 OR51M1Q9H341 326 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 SLC6A14Q9UN76 642 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 SAMHD1Q9Y3Z3 626 aaKnown RBP12.56□□□□□ -0.4
MSH2-201ENST00000233146 A0A1B0GVI7 797 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 ISM1B1AKI9 464 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 CDRT1O95170 752 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 IL1AP01583 271 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 IGHV2-70P01814 119 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 SLC6A1P30531 599 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 PXNP49023 591 aaPredicted RBP12.56□□□□□ -0.4
MSH2-201ENST00000233146 MXD1Q05195 221 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 HNRNPA0Q13151 305 aaKnown RBP12.56□□□□□ -0.4
MSH2-201ENST00000233146 BCL2L15Q5TBC7 163 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 ZNF425Q6IV72 752 aa12.56□□□□□ -0.4
MSH2-201ENST00000233146 ESRP1Q6NXG1 681 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms