RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 C21orf58P58505 322 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 SIGLEC14Q08ET2 396 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 CLPPQ16740 277 aaPredicted RBP19.82■□□□□ 0.76
SNX3-201ENST00000230085 STEAP3Q658P3 488 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 EIF3MQ7L2H7 374 aaKnown RBP19.82■□□□□ 0.76
SNX3-201ENST00000230085 SLC46A3Q7Z3Q1 461 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 SNX29P2Q8IUI4 249 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 CCDC71Q8IV32 467 aaPredicted RBP19.82■□□□□ 0.76
SNX3-201ENST00000230085 SFTPA1Q8IWL2 248 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 BEND7Q8N7W2 519 aaPredicted RBP19.82■□□□□ 0.76
SNX3-201ENST00000230085 APH1BQ8WW43 257 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 P2RY13Q9BPV8 354 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 SLC6A13Q9NSD5 602 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 EXD2Q9NVH0 621 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 IL17CQ9P0M4 197 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 DEC1Q9P2X7 70 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 PSORS1C1Q9UIG5 152 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 TECTAO75443 2155 aa19.82■□□□□ 0.76
SNX3-201ENST00000230085 ILVBLA1L0T0 632 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 A8MVJ9 347 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 SNPHO15079 494 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 KCNK2O95069 426 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 KRT6AP02538 564 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 KRT6BP04259 564 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 FABP3P05413 133 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 DGKAP23743 735 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 MAPK1P28482 360 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 HLA-FP30511 346 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 KRT6CP48668 564 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 DGKGP49619 791 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 ZNF33BQ06732 778 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 CDH18Q13634 790 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 VEZF1Q14119 521 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 GTDC1Q4AE62 458 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 CBLL1Q75N03 491 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 PHACTR4Q8IZ21 702 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 KRTCAP2Q8N6L1 136 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 PSMA8Q8TAA3 256 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 FIBINQ8TAL6 211 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 NUDT8Q8WV74 236 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 ZNF490Q9ULM2 529 aaPredicted RBP19.81■□□□□ 0.76
SNX3-201ENST00000230085 ABCG2Q9UNQ0 655 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 RAI2Q9Y5P3 530 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 ATG2BQ96BY7 2078 aa19.81■□□□□ 0.76
SNX3-201ENST00000230085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.8■□□□□ 0.76
SNX3-201ENST00000230085 PNMA8CA0A1B0GUJ8 204 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 AIREO43918 545 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 CLDN11O75508 207 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 GGT5P36269 586 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 STARD6P59095 220 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 NPRL3Q12980 569 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 ZNF177Q13360 481 aaPredicted RBP19.8■□□□□ 0.76
SNX3-201ENST00000230085 SIM2Q14190 667 aaPredicted RBP19.8■□□□□ 0.76
SNX3-201ENST00000230085 IQCCQ4KMZ1 466 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 ZRANB3Q5FWF4 1079 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 ZNF852Q6ZMS4 543 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 CHST9Q7L1S5 443 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 C10orf111Q8N326 155 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 PROX1Q92786 737 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 MYDGFQ969H8 173 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 ZNF486Q96H40 463 aaPredicted RBP19.8■□□□□ 0.76
SNX3-201ENST00000230085 AASDHPPTQ9NRN7 309 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 KRT84Q9NSB2 600 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 ABCB8Q9NUT2 735 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 RAPGEFL1Q9UHV5 662 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 POU2F3Q9UKI9 436 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 RNF6Q9Y252 685 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 PCDHGA3Q9Y5H0 932 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 PEX16Q9Y5Y5 336 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 KIAA1549LQ6ZVL6 1849 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 C9P02748 559 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 ZNF7P17097 686 aaPredicted RBP19.8■□□□□ 0.76
SNX3-201ENST00000230085 ALDH4A1P30038 563 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 CD70P32970 193 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 CASP3P42574 277 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 HSPA7P48741 367 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 IFITM2Q01629 132 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 VMACQ2NL98 169 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 LYPLAL1Q5VWZ2 237 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 CXorf57Q6NSI4 855 aaKnown RBP19.8■□□□□ 0.76
SNX3-201ENST00000230085 RPL3LQ92901 407 aaKnown RBP19.8■□□□□ 0.76
SNX3-201ENST00000230085 MSANTD3Q96H12 275 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 SHDQ96IW2 340 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 HBEGFQ99075 208 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 BARD1Q99728 777 aaKnown RBP19.8■□□□□ 0.76
SNX3-201ENST00000230085 TPK1Q9H3S4 243 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 SLCO3A1Q9UIG8 710 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 NDRG2Q9UN36 371 aaKnown RBP19.8■□□□□ 0.76
SNX3-201ENST00000230085 KLK4Q9Y5K2 254 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 U3KQV3 271 aa19.8■□□□□ 0.76
SNX3-201ENST00000230085 TRBV5-4A0A0C4DH59 114 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 A0A0D9SEW6 157 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 ANTXRLA6NF34 631 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 M0R082 166 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 EIF3FO00303 357 aaPredicted RBP19.79■□□□□ 0.76
SNX3-201ENST00000230085 MAN2B1O00754 1011 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 PCDHGA12O60330 932 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 FZD6O60353 706 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 EPB42P16452 691 aa19.79■□□□□ 0.76
SNX3-201ENST00000230085 HMGCLP35914 325 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms