RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 OR9A1PQ8NGU1 263 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 SETD7Q8WTS6 366 aaKnown RBP21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 TRIM43Q96BQ3 446 aaPredicted RBP21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 DOCK6Q96HP0 2047 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 TPD52L3Q96J77 140 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 NECTIN3Q9NQS3 549 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 SH3BP4Q9P0V3 963 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 INSL6Q9Y581 213 aa21.14■□□□□ 0.97
SMARCD2-201ENST00000225742 C17orf113A0A1B0GUU1 675 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 RGS10O43665 173 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 FOXD2O60548 495 aaPredicted RBP21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 NPPBP16860 134 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 ZNF8P17098 575 aaPredicted RBP21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 PBLDP30039 288 aaPredicted RBP21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 FMO3P31513 532 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 SELENOWP63302 87 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 NPRL3Q12980 569 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 GAB1Q13480 694 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 DHCR24Q15392 516 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 SF1Q15637 639 aaKnown RBP21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 CTF1Q16619 201 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 PLPP4Q5VZY2 271 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 SYTL1Q8IYJ3 562 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 PARP8Q8N3A8 854 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 GPR156Q8NFN8 814 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 OR52N2Q8NGI0 321 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 FOXJ1Q92949 421 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 YIPF6Q96EC8 236 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 LINC00615Q96LM1 132 aaPredicted RBP21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 PRM3Q9NNZ6 103 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 MYNNQ9NPC7 610 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 DMRT3Q9NQL9 472 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 SLC27A6Q9Y2P4 619 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 ADAMDEC1O15204 470 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 LILRB5O75023 590 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 DIRAS1O95057 198 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 CYP4B1P13584 511 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 EFNA1P20827 205 aaPredicted RBP21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 PIK3CBP42338 1070 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 PXNP49023 591 aaPredicted RBP21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 FADDQ13158 208 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 AQP6Q13520 282 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 SLBPQ14493 270 aaKnown RBP eCLIP21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 GRIN2CQ14957 1233 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 LAPTM4AQ15012 233 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 GCNT6Q5T4J0 391 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 C16orf87Q6PH81 154 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 CCDC80Q76M96 950 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 GALNT10Q86SR1 603 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 CFAP206Q8IYR0 622 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 TMIEQ8NEW7 156 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 MTG2Q9H4K7 406 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 IL23AQ9NPF7 189 aa21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 EXO1Q9UQ84 846 aaKnown RBP21.13■□□□□ 0.97
SMARCD2-201ENST00000225742 HOXC11O43248 304 aaPredicted RBP21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 GPR37L1O60883 481 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 FAM20BO75063 409 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 TNFRSF21O75509 655 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 RB1P06400 928 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 NUDT7P0C024 238 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 ITGB7P26010 798 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 IRS1P35568 1242 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 OCA2Q04671 838 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 SPCS2Q15005 226 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 ADNP2Q6IQ32 1131 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 OTOP2Q7RTS6 562 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 PRSS48Q7RTY5 328 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 NAGSQ8N159 534 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 GIPC3Q8TF64 312 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 ABTB1Q969K4 478 aaPredicted RBP21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 COX4I2Q96KJ9 171 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 HRASLS5Q96KN8 279 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 TMEM38AQ9H6F2 299 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 RUBCNLQ9H714 662 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 NOTCH4Q99466 2003 aa21.12■□□□□ 0.97
SMARCD2-201ENST00000225742 PIPSLA2A3N6 862 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 A8MVJ9 347 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 KPNA3O00505 521 aaPredicted RBP21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 ZBTB11O95625 1053 aaPredicted RBP21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 SOD1P00441 154 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 ADH5P11766 374 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 CRYBA2P53672 197 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 RPP38P78345 283 aaKnown RBP21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 LRRC26Q2I0M4 334 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 NXPE4Q6UWF7 544 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 IKBIPQ70UQ0 350 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 COMMD6Q7Z4G1 85 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 SLC30A8Q8IWU4 369 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 LRRC56Q8IYG6 542 aaPredicted RBP21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 METTL4Q8N3J2 472 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 OXR1Q8N573 874 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 ABHD11Q8NFV4 315 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 VN1R2Q8NFZ6 395 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 SLC5A11Q8WWX8 675 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 NUS1Q96E22 293 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 WRAP53Q9BUR4 548 aaKnown RBP21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 DPEP2Q9H4A9 486 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 GULP1Q9UBP9 304 aa21.11■□□□□ 0.97
SMARCD2-201ENST00000225742 IFNA14P01570 189 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms