RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 GGTA1PQ4G0N0 100 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 ERICH5Q6P6B1 374 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 TRAF7Q6Q0C0 670 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 ZNF605Q86T29 641 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 LGI4Q8N135 537 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 KBTBD8Q8NFY9 601 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 OR8J2Q8NGG1 315 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 VANGL1Q8TAA9 524 aaPredicted RBP11.94□□□□□ -0.5
NUP88-201ENST00000225696 ASB11Q8WXH4 323 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 COL21A1Q96P44 957 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 OR2A14Q96R47 310 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 DUSP26Q9BV47 211 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 SLC12A9Q9BXP2 914 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 KCTD5Q9NXV2 234 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 OGDHLQ9ULD0 1010 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 PADI2Q9Y2J8 665 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 ARHGAP33O14559 1287 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 ZNF821O75541 412 aaPredicted RBP11.94□□□□□ -0.5
NUP88-201ENST00000225696 SEMA3DO95025 777 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 MFN2O95140 757 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 CKBP12277 381 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 CXCR2P25025 360 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 MAPK1P28482 360 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 TNFSF8P32971 234 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 RFX2P48378 723 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 MVDP53602 400 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 CSNK2BP67870 215 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 SRSF11Q05519 484 aaKnown RBP11.94□□□□□ -0.5
NUP88-201ENST00000225696 SPANXN2Q5MJ10 180 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 METTL2BQ6P1Q9 378 aaKnown RBP11.94□□□□□ -0.5
NUP88-201ENST00000225696 FUT10Q6P4F1 479 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 CRTC1Q6UUV9 634 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 C17orf99Q6UX52 265 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 ANGPTL8Q6UXH0 198 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 TPGS1Q6ZTW0 290 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 LRRC70Q7Z2Q7 622 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 WDR53Q7Z5U6 358 aaPredicted RBP11.94□□□□□ -0.5
NUP88-201ENST00000225696 OR4K1Q8NGD4 311 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 POP5Q969H6 163 aaKnown RBP11.94□□□□□ -0.5
NUP88-201ENST00000225696 TRMT61AQ96FX7 289 aaKnown RBP11.94□□□□□ -0.5
NUP88-201ENST00000225696 FCRL1Q96LA6 429 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 SAMD11Q96NU1 681 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 MCCC1Q96RQ3 725 aaPredicted RBP11.94□□□□□ -0.5
NUP88-201ENST00000225696 PLSCR3Q9NRY6 295 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 RHCGQ9UBD6 479 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 CD84Q9UIB8 345 aa11.94□□□□□ -0.5
NUP88-201ENST00000225696 EXO1Q9UQ84 846 aaKnown RBP11.94□□□□□ -0.5
NUP88-201ENST00000225696 FRMPD3Q5JV73 1810 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 NINQ8N4C6 2090 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 E7EQ34 232 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 LOC110117498-PIK3R3F6TDL0 507 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 NDUFB5O43674 189 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 IDH3BO43837 385 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 BNIP3LO60238 219 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 CELF2O95319 508 aaKnown RBP11.93□□□□□ -0.5
NUP88-201ENST00000225696 GBAP04062 536 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 SPAM1P38567 509 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 RPS19P39019 145 aaKnown RBP11.93□□□□□ -0.5
NUP88-201ENST00000225696 SLC15A1P46059 708 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 SELENOWP63302 87 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 SPIBQ01892 262 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 BCL2L1Q07817 233 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 GANABQ14697 944 aaKnown RBP11.93□□□□□ -0.5
NUP88-201ENST00000225696 BAK1Q16611 211 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 MSANTD1Q6ZTZ1 278 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 BBS7Q8IWZ6 715 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 UBQLNLQ8IYU4 475 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 OR8H2Q8N162 312 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 GPR156Q8NFN8 814 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 LILRB4Q8NHJ6 448 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 CSGALNACT1Q8TDX6 532 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 C11orf24Q96F05 449 aaPredicted RBP11.93□□□□□ -0.5
NUP88-201ENST00000225696 CDK5RAP1Q96SZ6 601 aaKnown RBP11.93□□□□□ -0.5
NUP88-201ENST00000225696 MGLLQ99685 303 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 TSEN34Q9BSV6 310 aaKnown RBP11.93□□□□□ -0.5
NUP88-201ENST00000225696 KLF16Q9BXK1 252 aaPredicted RBP11.93□□□□□ -0.5
NUP88-201ENST00000225696 CEP44Q9C0F1 390 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 VPS29Q9UBQ0 182 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 ACSL6Q9UKU0 697 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 PEX16Q9Y5Y5 336 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 ALPK3Q96L96 1907 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 CCDC88CQ9P219 2028 aa11.93□□□□□ -0.5
NUP88-201ENST00000225696 MN1Q10571 1320 aaPredicted RBP11.92□□□□□ -0.5
NUP88-201ENST00000225696 CASP8AP2Q9UKL3 1982 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 AGAP14A8MT82 685 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 PDZK1P1A8MUH7 402 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 WWP2O00308 870 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 EIF2S1P05198 315 aaKnown RBP11.92□□□□□ -0.5
NUP88-201ENST00000225696 IGFBP1P08833 259 aaPredicted RBP11.92□□□□□ -0.5
NUP88-201ENST00000225696 JUPP14923 745 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 LHCGRP22888 699 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 AZGP1P25311 298 aaKnown RBP11.92□□□□□ -0.5
NUP88-201ENST00000225696 SOX3P41225 446 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 NSG1P42857 185 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 CRATP43155 626 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 PXNP49023 591 aaPredicted RBP11.92□□□□□ -0.5
NUP88-201ENST00000225696 SMARCB1Q12824 385 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 PTGES3Q15185 160 aaKnown RBP11.92□□□□□ -0.5
NUP88-201ENST00000225696 MICAQ29983 383 aa11.92□□□□□ -0.5
NUP88-201ENST00000225696 CCSMST1Q4G0I0 132 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms