RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 AGTRAPQ6RW13 159 aa17.14■□□□□ 0.33
PFN1-201ENST00000225655 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.33
PFN1-201ENST00000225655 SRRM1Q8IYB3 904 aaKnown RBP17.14■□□□□ 0.33
PFN1-201ENST00000225655 CYP4X1Q8N118 509 aa17.14■□□□□ 0.33
PFN1-201ENST00000225655 TM9SF4Q92544 642 aa17.14■□□□□ 0.33
PFN1-201ENST00000225655 ALKBH8Q96BT7 664 aaKnown RBP17.14■□□□□ 0.33
PFN1-201ENST00000225655 ZFYVE21Q9BQ24 234 aa17.14■□□□□ 0.33
PFN1-201ENST00000225655 DPH7Q9BTV6 452 aa17.14■□□□□ 0.33
PFN1-201ENST00000225655 MRPL46Q9H2W6 279 aaKnown RBP17.14■□□□□ 0.33
PFN1-201ENST00000225655 WWOXQ9NZC7 414 aa17.14■□□□□ 0.33
PFN1-201ENST00000225655 CTSFQ9UBX1 484 aa17.14■□□□□ 0.33
PFN1-201ENST00000225655 DOCK10Q96BY6 2186 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 SPTAN1Q13813 2472 aaKnown RBP17.13■□□□□ 0.33
PFN1-201ENST00000225655 LOC105369274A0A096LPK9 316 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 LOC102723532A0A0G2JNH3 316 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 A0A1W2PPM1 405 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 NCF1BA6NI72 391 aaPredicted RBP17.13■□□□□ 0.33
PFN1-201ENST00000225655 VSTM2BA6NLU5 285 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 NCF1CA8MVU1 366 aaPredicted RBP17.13■□□□□ 0.33
PFN1-201ENST00000225655 TCP11X1B4DZS4 312 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 MASP2O00187 686 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 GFAPP14136 432 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 NCF1P14598 390 aaPredicted RBP17.13■□□□□ 0.33
PFN1-201ENST00000225655 EMP3P54852 163 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 YBX1P67809 324 aaKnown RBP17.13■□□□□ 0.33
PFN1-201ENST00000225655 FHL5Q5TD97 284 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 PRAMEF13Q5VWM6 474 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 FBXO42Q6P3S6 717 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 TRABD2AQ86V40 505 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 OR4N4Q8N0Y3 316 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 METTL27Q8N6F8 245 aaPredicted RBP17.13■□□□□ 0.33
PFN1-201ENST00000225655 PGM2Q96G03 612 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 HAUS8Q9BT25 410 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 ACAT2Q9BWD1 397 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 SLC29A3Q9BZD2 475 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 VIPAS39Q9H9C1 493 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 ZNF304Q9HCX3 659 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 SLC6A20Q9NP91 592 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 SEMA3GQ9NS98 782 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 MID2Q9UJV3 735 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 IKZF3Q9UKT9 509 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 GRID1Q9ULK0 1009 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 HS3ST3B1Q9Y662 390 aa17.13■□□□□ 0.33
PFN1-201ENST00000225655 HEATR5BQ9P2D3 2071 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 PRRC2CQ9Y520 2896 aaKnown RBP17.12■□□□□ 0.33
PFN1-201ENST00000225655 BLACEA4D250 179 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 E7ENX8 843 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 MED26O95402 600 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 ITGA3P26006 1051 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 TBPL1P62380 186 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 ABATP80404 500 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 TAP2Q03519 686 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 NAE1Q13564 534 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 PRTGQ2VWP7 1150 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 CCDC153Q494R4 210 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 TECRLQ5HYJ1 363 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 SUSD1Q6UWL2 747 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 KIRREL2Q6UWL6 708 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 MBOAT1Q6ZNC8 495 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 ZADH2Q8N4Q0 377 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 DTWD1Q8N5C7 304 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 PDPRQ8NCN5 879 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 VPS50Q96JG6 964 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 GPR78Q96P69 363 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 ATOH8Q96SQ7 321 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 PLCD4Q9BRC7 762 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 ATG10Q9H0Y0 220 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 SOX17Q9H6I2 414 aaPredicted RBP17.12■□□□□ 0.33
PFN1-201ENST00000225655 MRPS30Q9NP92 439 aaKnown RBP17.12■□□□□ 0.33
PFN1-201ENST00000225655 ABCF3Q9NUQ8 709 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 XPR1Q9UBH6 696 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 MAU2Q9Y6X3 613 aa17.12■□□□□ 0.33
PFN1-201ENST00000225655 H0YGG7 62 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 AGFG2O95081 481 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 EIF2S1P05198 315 aaKnown RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 HRH2P25021 359 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 CRHR1P34998 444 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 GMPRP36959 345 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 ARF3P61204 181 aaPredicted RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 OCA2Q04671 838 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 PRDX1Q06830 199 aaKnown RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 RBBP7Q16576 425 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 MUM1Q2TAK8 710 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 TUBB8Q3ZCM7 444 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 SHISA6Q6ZSJ9 500 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 PAQR7Q86WK9 346 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 C4orf33Q8N1A6 199 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 PLD6Q8N2A8 252 aaKnown RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 PPFIBP2Q8ND30 876 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 OR11G2Q8NGC1 345 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 RHBDF1Q96CC6 855 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 SNRNP40Q96DI7 357 aaKnown RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 C19orf60Q96EN9 201 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 APOPT1Q96IL0 206 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 C10orf90Q96M02 699 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 ILKAPQ9H0C8 392 aaPredicted RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 ZBTB20Q9HC78 741 aaPredicted RBP17.11■□□□□ 0.33
PFN1-201ENST00000225655 MKS1Q9NXB0 559 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 MAP10Q9P2G4 905 aa17.11■□□□□ 0.33
PFN1-201ENST00000225655 CPSF2Q9P2I0 782 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms