RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 PDSS2Q86YH6 399 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 RNF175Q8N4F7 328 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 TBC1D19Q8N5T2 526 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 NT5CQ8TCD5 201 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 ZNF483Q8TF39 744 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 COL26A1Q96A83 441 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 SLC45A3Q96JT2 553 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 TMEM237Q96Q45 408 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 DPH2Q9BQC3 489 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 EFCAB11Q9BUY7 163 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 GPR87Q9BY21 358 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 CENPHQ9H3R5 247 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 ACTL8Q9H568 366 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 PRORYQ9H606 182 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 ZNF304Q9HCX3 659 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 SEMA4BQ9NPR2 832 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 IFT80Q9P2H3 777 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 SLC17A7Q9P2U7 560 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 PLLPQ9Y342 182 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 PCDHGA6Q9Y5G7 932 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 KMT2BQ9UMN6 2715 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 C21orf140B9A014 251 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 RGS16O15492 202 aaPredicted RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CREG1O75629 220 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 RAB40ALP0C0E4 278 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CPA3P15088 417 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 IL1RNP18510 177 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 PIK3CGP48736 1102 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 RAB8AP61006 207 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 RPS15P62841 145 aaKnown RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 HERVK_113P63132 956 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 MAT1AQ00266 395 aaKnown RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 ERV3-1Q14264 604 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 NCF4Q15080 339 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 TNFAIP8L3Q5GJ75 292 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 TOR1AIP1Q5JTV8 583 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 METTL2BQ6P1Q9 378 aaKnown RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 SHISA6Q6ZSJ9 500 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 EXOC3L1Q86VI1 746 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 MYLK4Q86YV6 388 aaPredicted RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 AMER3Q8N944 861 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 TRPV3Q8NET8 790 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 OR7G3Q8NG95 312 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 UTP15Q8TED0 518 aaKnown RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 STARD8Q92502 1023 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 MMABQ96EY8 250 aaPredicted RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 APOPT1Q96IL0 206 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 C1QTNF3Q9BXJ4 246 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 ERVK-6Q9BXR3 956 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 SLC6A16Q9GZN6 736 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 DRC3Q9H069 523 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 RHBGQ9H310 441 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 ACTR8Q9H981 624 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CTSFQ9UBX1 484 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 ITPR1Q14643 2758 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 MGAQ8IWI9 3026 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 ANKDD1BA6NHY2 528 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 SGK494L7N484 410 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 SUPT7LO94864 414 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 SLC35G6P0C7Q6 338 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 ZNF888P0CJ79 500 aaPredicted RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 SMIM10L1P0DMW3 83 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 PRKAR1AP10644 381 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 MYL2P10916 166 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 HNRNPH1P31943 449 aaKnown RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CCR10P46092 362 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 UCNP55089 124 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CACNA1BQ00975 2339 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 TRAF3Q13114 568 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 LAPTM5Q13571 262 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 FAM53BQ14153 422 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CASP8Q14790 479 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CPSF6Q16630 551 aaKnown RBP eCLIP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 NDUFA9Q16795 377 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CCDC153Q494R4 210 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 GRHL2Q6ISB3 625 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 PRMT9Q6P2P2 845 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 LAPTM4BQ86VI4 370 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 LAS2Q8IYD9 372 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 AFAP1L2Q8N4X5 818 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 L3MBTL4Q8NA19 623 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 ARMC2Q8NEN0 867 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 TCP10LQ8TDR4 215 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 TRPC4APQ8TEL6 797 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CCT6BQ92526 530 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 ATP6V1E2Q96A05 226 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 SMIM10Q96HG1 83 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 PITHD1Q9GZP4 211 aaPredicted RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 MKS1Q9NXB0 559 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 GPN3Q9UHW5 284 aaPredicted RBP13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 ZNF225Q9UK10 706 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 KCND3Q9UK17 655 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 TCFL5Q9UL49 500 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 CDC14AQ9UNH5 594 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 NAALAD2Q9Y3Q0 740 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 SLC22A7Q9Y694 548 aa13.67□□□□□ -0.22
SUPT4H1-201ENST00000225504 A0A0G2JN53 185 aa13.66□□□□□ -0.22
SUPT4H1-201ENST00000225504 LRIT2A6NDA9 550 aa13.66□□□□□ -0.22
SUPT4H1-201ENST00000225504 ZNF860A6NHJ4 632 aa13.66□□□□□ -0.22
SUPT4H1-201ENST00000225504 C9J4A7 227 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms