RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TXNL4AP83876 142 aaKnown RBP17.85■□□□□ 0.45
CLIP2-201ENST00000223398 XIAPP98170 497 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 IL18R1Q13478 541 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 DCTN2Q13561 401 aaKnown RBP17.85■□□□□ 0.45
CLIP2-201ENST00000223398 ZNF678Q5SXM1 525 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 PRPF38BQ5VTL8 546 aaKnown RBP17.85■□□□□ 0.45
CLIP2-201ENST00000223398 NANOGNBQ7Z5D8 188 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 ZC3H3Q8IXZ2 948 aaKnown RBP17.85■□□□□ 0.45
CLIP2-201ENST00000223398 TCEAL8Q8IYN2 117 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 TRIM39Q9HCM9 518 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 ZIM2Q9NZV7 527 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 NOS1APO75052 506 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-201ENST00000223398 HSD11B1P28845 292 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 SLC5A9Q2M3M2 681 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 KHDC1Q4VXA5 237 aaKnown RBP17.84■□□□□ 0.45
CLIP2-201ENST00000223398 ALG1LQ6GMV1 187 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 TTLL10Q6ZVT0 673 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 OR5K1Q8NHB7 308 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 C10orf82Q8WW14 230 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 C1QTNF1Q9BXJ1 281 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 CAPN5O15484 640 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-201ENST00000223398 PROZP22891 400 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 PAX7P23759 505 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 IL12AP29459 219 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 NIPAL4Q0D2K0 466 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 PDSS1Q5T2R2 415 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 FIBINQ8TAL6 211 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 FOXJ1Q92949 421 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 DIRAS2Q96HU8 199 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 NSUN5Q96P11 429 aaKnown RBP17.84■□□□□ 0.45
CLIP2-201ENST00000223398 EPYCQ99645 322 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 PTGES2Q9H7Z7 377 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 FBRSL1Q9HCM7 1045 aaKnown RBP17.84■□□□□ 0.45
CLIP2-201ENST00000223398 MARCH4Q9P2E8 410 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-201ENST00000223398 SNX4O95219 450 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 LDOC1O95751 146 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-201ENST00000223398 CD2P06729 351 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 H1F0P07305 194 aaKnown RBP17.84■□□□□ 0.45
CLIP2-201ENST00000223398 GALK1P51570 392 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 NCEH1Q6PIU2 408 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 NPWQ8N729 165 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 RASGEF1AQ8N9B8 481 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 ZBED3Q96IU2 234 aaPredicted RBP17.84■□□□□ 0.45
CLIP2-201ENST00000223398 TCF7L1Q9HCS4 588 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 ARPC2O15144 300 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 SCO2O43819 266 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 VEGFDO43915 354 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 ZNF217O75362 1048 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 ZNF20P17024 532 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 HNRNPKP61978 463 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■■■■ 27.9
CLIP2-201ENST00000223398 TCEAL4Q96EI5 215 aa17.84■□□□□ 0.45
CLIP2-201ENST00000223398 HYKKA2RU49 373 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 FAM170BA6NMN3 283 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 OR5K4A6NMS3 321 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 FAM227AF5H4B4 570 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 TBX1O43435 398 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 TBPL1P62380 186 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 RIN1Q13671 783 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 NFE2L1Q14494 772 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 HMGN2P46Q86SG4 172 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 GPAT4Q86UL3 456 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 FIZ1Q96SL8 496 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 DEFB126Q9BYW3 111 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 C8orf4Q9NR00 106 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 RHCGQ9UBD6 479 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 WDR45Q9Y484 360 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 NUP188Q5SRE5 1749 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 SYPP08247 313 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 ZNF3P17036 446 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 AFF1P51825 1210 aaKnown RBP17.83■□□□□ 0.45
CLIP2-201ENST00000223398 ZNF763Q0D2J5 394 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 CRTC2Q53ET0 693 aaPredicted RBP17.83■□□□□ 0.45
CLIP2-201ENST00000223398 GEMIN6Q8WXD5 167 aaKnown RBP17.83■□□□□ 0.45
CLIP2-201ENST00000223398 ACTL8Q9H568 366 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 ZDHHC7Q9NXF8 308 aa17.83■□□□□ 0.45
CLIP2-201ENST00000223398 RBMS1P29558 406 aaKnown RBP17.83■□□□□ 0.44
CLIP2-201ENST00000223398 HSDL2Q6YN16 418 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 ATG14Q6ZNE5 492 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 NODALQ96S42 347 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 EBF2Q9HAK2 575 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 LYARQ9NX58 379 aaKnown RBP17.83■□□□□ 0.44
CLIP2-201ENST00000223398 PRSS56P0CW18 603 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 PIK3CBP42338 1070 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 SOX9P48436 509 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 HHEXQ03014 270 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 ZNF676Q8N7Q3 588 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 ZDHHC1Q8WTX9 485 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 FGF13Q92913 245 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 DHRS1Q96LJ7 313 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 ATXN10Q9UBB4 475 aa17.83■□□□□ 0.44
CLIP2-201ENST00000223398 C1GALT1C1LP0DN25 315 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 SRCP12931 536 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 ITGA3P26006 1051 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 RAB25P57735 213 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 RASGEF1BQ0VAM2 473 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 C3orf58Q8NDZ4 430 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 LRCH3Q96II8 777 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 CDCA3Q99618 268 aaPredicted RBP17.82■□□□□ 0.44
CLIP2-201ENST00000223398 RFXAPO00287 272 aa17.82■□□□□ 0.44
CLIP2-201ENST00000223398 JUPP14923 745 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms