RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TSNAXIP1Q2TAA8 658 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 ADNP2Q6IQ32 1131 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 MRGPREQ86SM8 312 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 PDSS2Q86YH6 399 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 RAB43Q86YS6 212 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.03□□□□□ -0.48
LSM5-201ENST00000223084 TEX9Q8N6V9 391 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 NT5CQ8TCD5 201 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 EPS8L3Q8TE67 593 aaKnown RBP12.03□□□□□ -0.48
LSM5-201ENST00000223084 MZB1Q8WU39 189 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.03□□□□□ -0.48
LSM5-201ENST00000223084 MIEF2Q96C03 454 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 MTBPQ96DY7 904 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 PHF21BQ96EK2 531 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 MVB12AQ96EY5 273 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 MESP1Q9BRJ9 268 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 CAPS2Q9BXY5 557 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 AICDAQ9GZX7 198 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 KLHL31Q9H511 634 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 WDR54Q9H977 334 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 HCN3Q9P1Z3 774 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 XPR1Q9UBH6 696 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 OPTCQ9UBM4 332 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 ZNF282Q9UDV7 671 aaPredicted RBP12.03□□□□□ -0.48
LSM5-201ENST00000223084 FETUBQ9UGM5 382 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 ZNF490Q9ULM2 529 aaPredicted RBP12.03□□□□□ -0.48
LSM5-201ENST00000223084 COL6A6A6NMZ7 2263 aa12.03□□□□□ -0.48
LSM5-201ENST00000223084 A0A1W2PPM1 405 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 CCDC189A1A4V9 331 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 C4orf51C9J302 202 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 K7EPI3 171 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 TK2O00142 265 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 DNAJB6O75190 326 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 RDH16O75452 317 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 KLHL18O94889 574 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 NSA2O95478 260 aaKnown RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 SBK3P0C264 359 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 ZNF888P0CJ79 500 aaPredicted RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 CCL11P51671 97 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 ALDH18A1P54886 795 aaKnown RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 IRF8Q02556 426 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 RGS1Q08116 209 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 HYAL2Q12891 473 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 KCNAB2Q13303 367 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 PWP1Q13610 501 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 NAA30Q147X3 362 aaPredicted RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 TOR1AIP1Q5JTV8 583 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 TMIGD1Q6UXZ0 262 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 PPP1R32Q7Z5V6 425 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 CYP4X1Q8N118 509 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 KRT78Q8N1N4 520 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 PTGR2Q8N8N7 351 aaPredicted RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 LSM14AQ8ND56 463 aaKnown RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 OR2W6PQ8NHA6 318 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 CREB3L4Q8TEY5 395 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 AENQ8WTP8 325 aaKnown RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 CCT6BQ92526 530 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 PTCD3Q96EY7 689 aaKnown RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 PARD6BQ9BYG5 372 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 EHD1Q9H4M9 534 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 ANKHQ9HCJ1 492 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 P4HTMQ9NXG6 502 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 TMEM216Q9P0N5 145 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 NXT1Q9UKK6 140 aaKnown RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 NAALAD2Q9Y3Q0 740 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 MAP4K5Q9Y4K4 846 aa12.02□□□□□ -0.49
LSM5-201ENST00000223084 HELZ2Q9BYK8 2649 aaKnown RBP12.02□□□□□ -0.49
LSM5-201ENST00000223084 TNRC6AQ8NDV7 1962 aaKnown RBP12.01□□□□□ -0.49
LSM5-201ENST00000223084 IGLV3-12A0A075B6K2 115 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 EIF4E1BA6NMX2 242 aaKnown RBP12.01□□□□□ -0.49
LSM5-201ENST00000223084 H0YIG0 161 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 SOCS6O14544 535 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 PRPF4O43172 522 aaKnown RBP eCLIP12.01□□□□□ -0.49
LSM5-201ENST00000223084 ALOX12BO75342 701 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 JRKO75564 520 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 C1QL1O75973 258 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 EPB42P16452 691 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 ALOX12P18054 663 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 NR1D1P20393 614 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 MMP11P24347 488 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 CXCR2P25025 360 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 EEF1DP29692 281 aaKnown RBP12.01□□□□□ -0.49
LSM5-201ENST00000223084 RAB8AP61006 207 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 OLR1P78380 273 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 PCBP2Q15366 365 aaKnown RBP eCLIP12.01□□□□□ -0.49
LSM5-201ENST00000223084 DEFB134Q4QY38 66 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 FAAH2Q6GMR7 532 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 WDR93Q6P2C0 686 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 GOLGA7Q7Z5G4 137 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 VN1R5Q7Z5H4 357 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 ZC3H7AQ8IWR0 971 aaKnown RBP12.01□□□□□ -0.49
LSM5-201ENST00000223084 TMEM151AQ8N4L1 468 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 AFAP1L2Q8N4X5 818 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 TRPV3Q8NET8 790 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 OR5T3Q8NGG3 340 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 UTP15Q8TED0 518 aaKnown RBP12.01□□□□□ -0.49
LSM5-201ENST00000223084 WDR34Q96EX3 536 aa12.01□□□□□ -0.49
LSM5-201ENST00000223084 MRPL57Q9BQC6 102 aaKnown RBP12.01□□□□□ -0.49
LSM5-201ENST00000223084 CRB3Q9BUF7 120 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms