RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 CSF2RAP15509 400 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 PRKACGP22612 351 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 PGGT1BP53609 377 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 PPP3R1P63098 170 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 MVKQ03426 396 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 ZNF805Q5CZA5 627 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 RTP2Q5QGT7 225 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 NPWQ8N729 165 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 TNFAIP8L1Q8WVP5 186 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 KLHL6Q8WZ60 621 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 HSH2DQ96JZ2 352 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 SMURF2Q9HAU4 748 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 FARSBQ9NSD9 589 aaKnown RBP11.14□□□□□ -0.63
NOD1-201ENST00000222823 MARCH4Q9P2E8 410 aaPredicted RBP11.14□□□□□ -0.63
NOD1-201ENST00000222823 MBD2Q9UBB5 411 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 FAM172BPA6NC97 362 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 ACADLP28330 430 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 ATP4BP51164 291 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 AP3S2P59780 193 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 ABATP80404 500 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 USP43Q70EL4 1123 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 GALNT15Q8N3T1 639 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 PIK3R3Q92569 461 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 JSRP1Q96MG2 331 aaPredicted RBP11.14□□□□□ -0.63
NOD1-201ENST00000222823 ANXA2P2A6NMY6 339 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 A8MUA0 341 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 H7BY64 318 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 C6orf47O95873 294 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 ANXA2P07355 339 aaKnown RBP11.14□□□□□ -0.63
NOD1-201ENST00000222823 ZNF12P17014 697 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 ETV3P41162 512 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 ARSDP51689 593 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 KCNC3Q14003 757 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 NOXRED1Q6NXP6 359 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 PDSS2Q86YH6 399 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 CEP97Q8IW35 865 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 UBE2J2Q8N2K1 259 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 LINC00471Q8N535 108 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 PRAP1Q96NZ9 151 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 RAD9AQ99638 391 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 RPF2Q9H7B2 306 aaKnown RBP11.14□□□□□ -0.63
NOD1-201ENST00000222823 ZNF221Q9UK13 617 aa11.14□□□□□ -0.63
NOD1-201ENST00000222823 FOCADQ5VW36 1801 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 PRODHO43272 600 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 TSPAN6O43657 245 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 ST3GAL3Q11203 375 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 TYSND1Q2T9J0 566 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 ITPRIPL2Q3MIP1 535 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 ZUFSPQ96AP4 578 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 MOCOSQ96EN8 888 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 AURKBQ96GD4 344 aaPredicted RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 CAPN14A8MX76 684 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 AXIN1O15169 862 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 C8orf89P0DMQ9 161 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 ACVR2AP27037 513 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 SMSP52788 366 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 SPATS1Q496A3 300 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 UNC50Q53HI1 259 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 SFT2D3Q587I9 215 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 PRPF38BQ5VTL8 546 aaKnown RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 PSAPL1Q6NUJ1 521 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 ERN2Q76MJ5 926 aaKnown RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 GHDCQ8N2G8 530 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 TMCO6Q96DC7 493 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 MAPKAP1Q9BPZ7 522 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 UCK2Q9BZX2 261 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 MED28Q9H204 178 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 PIGUQ9H490 435 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 PNO1Q9NRX1 252 aaKnown RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 MALT1Q9UDY8 824 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 MYO18AQ92614 2054 aaKnown RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 ANKRD31Q8N7Z5 1873 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 C2orf78A6NCI8 922 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 MYADML2A6NDP7 307 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 CPNE3O75131 537 aaKnown RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 RCBTB2O95199 551 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 RENP00797 406 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 FUT4P22083 530 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 HMGCLP35914 325 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 MEF2AQ02078 507 aaPredicted RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 ENPP2Q13822 863 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 EOGTQ5NDL2 527 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 C10orf62Q5T681 223 aaPredicted RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 ERI1Q8IV48 349 aaKnown RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 AVL9Q8NBF6 648 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 OR56A1Q8NGH5 318 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 SLC25A36Q96CQ1 311 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 CNDP2Q96KP4 475 aaKnown RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 DGAT2Q96PD7 388 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 ALPK1Q96QP1 1244 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 GFM1Q96RP9 751 aaKnown RBP11.13□□□□□ -0.63
NOD1-201ENST00000222823 GAL3ST1Q99999 423 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 ARHGAP39Q9C0H5 1083 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 SP140LQ9H930 580 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 Q9N2J8 555 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 ACSL5Q9ULC5 683 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 PLAGL1Q9UM63 463 aa11.13□□□□□ -0.63
NOD1-201ENST00000222823 A0A1W2PQ72 361 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms