RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 TNPO3Q9Y5L0 923 aaKnown RBP14.17□□□□□ -0.14
PTPRA-201ENST00000216877 A0A0G2JPF8 293 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 HNRNPCL3B7ZW38 293 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 STX16O14662 325 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 PSMD3O43242 534 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 OR5F1O95221 314 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 HNRNPCL4P0DMR1 293 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 HAPLN1P10915 354 aaPredicted RBP14.16□□□□□ -0.14
PTPRA-201ENST00000216877 ANXA3P12429 323 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 S100A3P33764 101 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 AVPR1BP47901 424 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 KIAA1024LP59773 190 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 COX10Q12887 443 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 CRTC2Q53ET0 693 aaPredicted RBP14.16□□□□□ -0.14
PTPRA-201ENST00000216877 OR7D4Q8NG98 312 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 PIH1D2Q8WWB5 315 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 WNT8BQ93098 351 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 ULK4Q96C45 1275 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 HSH2DQ96JZ2 352 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 MRGPRX2Q96LB1 330 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 C11orf16Q9NQ32 467 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 NUDT15Q9NV35 164 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 CLEC2DQ9UHP7 191 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF487B1APH4 448 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 GLP2RO95838 553 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 CBX7O95931 251 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 LMO2P25791 158 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 CENPAP49450 140 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 CDH12P55289 794 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 CSNK2BP67870 215 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 ABRQ12979 859 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 PAFAH1B3Q15102 231 aaKnown RBP14.16□□□□□ -0.14
PTPRA-201ENST00000216877 C10orf111Q8N326 155 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 OR8J3Q8NGG0 315 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF578Q96N58 590 aaPredicted RBP14.16□□□□□ -0.14
PTPRA-201ENST00000216877 EGFL8Q99944 293 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 FDXACB1Q9BRP7 624 aaPredicted RBP14.16□□□□□ -0.14
PTPRA-201ENST00000216877 TKTL2Q9H0I9 626 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 SLC28A3Q9HAS3 691 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 DNAJC27Q9NZQ0 273 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 A0A075B6Q4 140 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 TNFRSF11BO00300 401 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 JUPP14923 745 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 RECQLP46063 649 aaPredicted RBP14.16□□□□□ -0.14
PTPRA-201ENST00000216877 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.16□□□□□ -0.14
PTPRA-201ENST00000216877 SWI5Q1ZZU3 235 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 C18orf21Q32NC0 220 aaPredicted RBP14.16□□□□□ -0.14
PTPRA-201ENST00000216877 BICRALQ6AI39 1079 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 KIAA0930Q6ICG6 404 aaPredicted RBP14.16□□□□□ -0.14
PTPRA-201ENST00000216877 OR2T35Q8NGX2 323 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 AP2M1Q96CW1 435 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF599Q96NL3 588 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 KLK4Q9Y5K2 254 aa14.16□□□□□ -0.14
PTPRA-201ENST00000216877 PRR23D1E9PI22 279 aaPredicted RBP14.15□□□□□ -0.14
PTPRA-201ENST00000216877 GTPBP1O00178 669 aaKnown RBP14.15□□□□□ -0.14
PTPRA-201ENST00000216877 DCLK1O15075 740 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 PRR23D2P0DMB1 279 aaPredicted RBP14.15□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.15□□□□□ -0.144e-8■■□□□ 14.3
PTPRA-201ENST00000216877 ALKAL2Q6UX46 152 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 TMIGD1Q6UXZ0 262 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 Q6ZSR9 355 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 CHPFQ8IZ52 775 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 TMEM132CQ8N3T6 1108 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 PIGKQ92643 395 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 FBXL2Q9UKC9 423 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 ACSL5Q9ULC5 683 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 PRELID3BQ9Y3B1 194 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 DICER1Q9UPY3 1922 aaKnown RBP14.15□□□□□ -0.14
PTPRA-201ENST00000216877 OR5K4A6NMS3 321 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 SGCEO43556 437 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 RRASP10301 218 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 FEN1P39748 380 aaKnown RBP14.15□□□□□ -0.14
PTPRA-201ENST00000216877 OR1E2P47887 323 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 ERVK-25P63136 954 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 DSC1Q08554 894 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 C1DQ13901 141 aaKnown RBP14.15□□□□□ -0.14
PTPRA-201ENST00000216877 KLHL22Q53GT1 634 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 PDZD3Q86UT5 571 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 CILP2Q8IUL8 1156 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 MS4A15Q8N5U1 240 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 ZFP41Q8N8Y5 198 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 SYT14Q8NB59 555 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 OR11H4Q8NGC9 324 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 CRELD1Q96HD1 420 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 APOL5Q9BWW9 433 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 SLC6A13Q9NSD5 602 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 CLN6Q9NWW5 311 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 MPP6Q9NZW5 540 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 SLC6A14Q9UN76 642 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 UPK3BL1B0FP48 263 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 UPK3BL2E5RIL1 263 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 HAS3O00219 553 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 CD86P42081 329 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 CTBP2P56545 445 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 BACE1P56817 501 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 TSPAN5P62079 268 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 SPIBQ01892 262 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 ZNF169Q14929 603 aaPredicted RBP14.15□□□□□ -0.14
PTPRA-201ENST00000216877 USP30Q70CQ3 517 aa14.15□□□□□ -0.14
PTPRA-201ENST00000216877 SLC5A8Q8N695 610 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms