RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PRMT3O60678 531 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ABATP80404 500 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 DMWDQ09019 674 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PLCL1Q15111 1095 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 UGT8Q16880 541 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 C6orf10Q5SRN2 563 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 NANOGP8Q6NSW7 305 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TRIM48Q8IWZ4 208 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 METTL4Q8N3J2 472 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 C1orf216Q8TAB5 229 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PPM1MQ96MI6 270 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PKP2Q99959 881 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MS4A8Q9BY19 250 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 NANOGQ9H9S0 305 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GMPR2Q9P2T1 348 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CPNE7Q9UBL6 633 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 DTNAQ9Y4J8 743 aa18.85■□□□□ 0.61
TNFRSF1A-201ENST00000162749 OR1F1O43749 312 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 GBAP04062 536 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ZCCHC18P0CG32 403 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 S100A3P33764 101 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 C21orf58P58505 322 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PWP1Q13610 501 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 DPY19L1Q2PZI1 675 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SPATA24Q86W54 205 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TICAM1Q8IUC6 712 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CDC26Q8NHZ8 85 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SLC37A2Q8TED4 501 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 DPH7Q9BTV6 452 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TM9SF3Q9HD45 589 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 POT1Q9NUX5 634 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ISM1B1AKI9 464 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TLR4O00206 839 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 KCNH1O95259 989 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 VIPP01282 170 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CAPNS1P04632 268 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 ASMTP46597 345 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 UBE2IP63279 158 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 KIAA1614Q5VZ46 1190 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 PRR23BQ6ZRT6 265 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TMEFF1Q8IYR6 380 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 OR7A2PQ8NGA2 310 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 WDR48Q8TAF3 677 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 LRGUKQ96M69 825 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 CGREF1Q99674 301 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 IER2Q9BTL4 223 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 TWSG1Q9GZX9 223 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 SERHLQ9NQF3 203 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 VAPAQ9P0L0 249 aa18.84■□□□□ 0.61
TNFRSF1A-201ENST00000162749 KIR2DS5A0A0G2JLQ3 304 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 A0A0G2JNG1 304 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 OR5K4A6NMS3 321 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KIR2DS3K7RE56 304 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 B3GALT4O96024 378 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PDGFBP01127 241 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CSF2P04141 144 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 NME1P15531 152 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SERPINB1P30740 379 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ZNF763Q0D2J5 394 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KIR2DS5Q14953 304 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HKDC1Q2TB90 917 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PGS1Q32NB8 556 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DEPDC1Q5TB30 811 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KHDRBS2Q5VWX1 349 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SLC36A4Q6YBV0 504 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 GPR180Q86V85 440 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TMEM126BQ8IUX1 230 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TMEM102Q8N9M5 508 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.83■□□□□ 0.62e-11■■■■■ 27.3
TNFRSF1A-201ENST00000162749 ZFPM2Q8WW38 1151 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TMEM184CQ9NVA4 438 aa18.83■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TRBC2A0A5B9 178 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 PLPP1O14494 284 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 DNAJA2O60884 412 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 C8BP07358 591 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HSD17B1P14061 328 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 HOXB3P14651 431 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CMPK1P30085 196 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 KIR3DL1P43629 444 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 MED21Q13503 144 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CWF19L1Q69YN2 538 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SLC9B2Q86UD5 537 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ICA1LQ8NDH6 482 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 FLVCR1-AS1Q8TAF5 88 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 BTBD9Q96Q07 612 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ZNF717Q9BY31 904 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 REXO4Q9GZR2 422 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TMEM131Q92545 1883 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SPEGQ15772 3267 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 C15orf38-AP3S2A0A0A6YYH1 394 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SCAMP2O15127 329 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SEMA3DO95025 777 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 CCNDBP1O95273 360 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 COX7A2P14406 83 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 GRK3P35626 688 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 ZXDAP98168 799 aa18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 SRSF11Q05519 484 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 TRAP1Q12931 704 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-201ENST00000162749 OR4F3Q6IEY1 312 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms