RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 C6orf10Q5SRN2 563 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 FRG2Q64ET8 278 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 TMEM26Q6ZUK4 368 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 SELENOMQ8WWX9 145 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 FRG2BQ96QU4 278 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 SPNS1Q9H2V7 528 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 CCM2LQ9NUG4 571 aaPredicted RBP21.13■□□□□ 0.97
HOXC8-201ENST00000040584 ISM1B1AKI9 464 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 H0YIV9 168 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 NPPAP01160 153 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 IL10P22301 178 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 HOXD12P35452 270 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 ATXN3P54252 364 aaPredicted RBP21.13■□□□□ 0.97
HOXC8-201ENST00000040584 PRDX1Q06830 199 aaKnown RBP21.13■□□□□ 0.97
HOXC8-201ENST00000040584 SLBPQ14493 270 aaKnown RBP eCLIP21.13■□□□□ 0.97
HOXC8-201ENST00000040584 RBBP5Q15291 538 aaKnown RBP21.13■□□□□ 0.97
HOXC8-201ENST00000040584 HLA-BQ31612 363 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 BLOC1S3Q6QNY0 202 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 COQ10BQ9H8M1 238 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 MAP10Q9P2G4 905 aa21.13■□□□□ 0.97
HOXC8-201ENST00000040584 OR6C74A6NCV1 312 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 H7BY64 318 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 NR5A2O00482 541 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 PPM1DO15297 605 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 MAP7Q14244 749 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 SF1Q15637 639 aaKnown RBP21.12■□□□□ 0.97
HOXC8-201ENST00000040584 ADNP2Q6IQ32 1131 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 OGFOD3Q6PK18 319 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 RNF175Q8N4F7 328 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 ZNF740Q8NDX6 193 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 OR9I1Q8NGQ6 314 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 OR10G6Q8NH81 332 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 WDR20Q8TBZ3 569 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 LRTOMTQ8WZ04 291 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 SLCO4A1Q96BD0 722 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 PRAP1Q96NZ9 151 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 EFCAB11Q9BUY7 163 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 IL21RQ9HBE5 538 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 SNX13Q9Y5W8 968 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 CSNK1G3Q9Y6M4 447 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 R4GN57 208 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 CABIN1Q9Y6J0 2220 aa21.12■□□□□ 0.97
HOXC8-201ENST00000040584 LSM1O15116 133 aaKnown RBP21.11■□□□□ 0.97
HOXC8-201ENST00000040584 POLR2CP19387 275 aaPredicted RBP21.11■□□□□ 0.97
HOXC8-201ENST00000040584 NR1H2P55055 460 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 TRIM61Q5EBN2 209 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 C6orf136Q5SQH8 315 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.11■□□□□ 0.97
HOXC8-201ENST00000040584 C6orf52Q5T4I8 152 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 PPP4R4Q6NUP7 873 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 BORAQ6PGQ7 559 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 C17orf82Q86X59 251 aaPredicted RBP21.11■□□□□ 0.97
HOXC8-201ENST00000040584 RBM12BQ8IXT5 1001 aaKnown RBP21.11■□□□□ 0.97
HOXC8-201ENST00000040584 CEP76Q8TAP6 659 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 CAPN10Q9HC96 672 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 ACTR3BQ9P1U1 418 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 PCDHGA11Q9Y5H2 935 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 IGKV1-8A0A0C4DH67 115 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 A0A1B0GTQ1 180 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 A0A1W2PP18 115 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 ARHGAP10A1A4S6 786 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 SERTM1A2A2V5 107 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 PIPSLA2A3N6 862 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 SLC28A1O00337 649 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 TFAP2AP05549 437 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 GIMD1P0DJR0 217 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 FASLGP48023 281 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 MYBPC1Q00872 1141 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 HMGCS1Q01581 520 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 ZNF33BQ06732 778 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 DDX39BQ13838 428 aaKnown RBP21.11■□□□□ 0.97
HOXC8-201ENST00000040584 ATP6AP1LQ52LC2 224 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 PAGE2BQ5JRK9 111 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 LCN8Q6JVE9 175 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 MED27Q6P2C8 311 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 ERMP1Q7Z2K6 904 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 SATL1Q86VE3 508 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 RETREG3Q86VR2 466 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 FAM129CQ86XR2 697 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 GATAD2AQ86YP4 633 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 ABHD11Q8NFV4 315 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 OR2L3Q8NG85 312 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 OR7G3Q8NG95 312 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 LRRC58Q96CX6 371 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 MRPS30Q9NP92 439 aaKnown RBP21.11■□□□□ 0.97
HOXC8-201ENST00000040584 GPR45Q9Y5Y3 372 aa21.11■□□□□ 0.97
HOXC8-201ENST00000040584 RGS14O43566 566 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 PCNAP12004 261 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 EPHA8P29322 1005 aaPredicted RBP21.1■□□□□ 0.97
HOXC8-201ENST00000040584 CCR8P51685 355 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 KCNK10P57789 538 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 LSAMPQ13449 338 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 BIRC2Q13490 618 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 RABEPKQ7Z6M1 372 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 CHERPQ8IWX8 916 aaKnown RBP21.1■□□□□ 0.97
HOXC8-201ENST00000040584 SLC15A3Q8IY34 581 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 GPR156Q8NFN8 814 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 PPWD1Q96BP3 646 aaKnown RBP21.1■□□□□ 0.97
HOXC8-201ENST00000040584 SLC45A3Q96JT2 553 aa21.1■□□□□ 0.97
HOXC8-201ENST00000040584 MTERF1Q99551 399 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms