RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 AMD1P17707 334 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 CAPN3P20807 821 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 CXCR2P25025 360 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 HSD3B2P26439 372 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SHMT2P34897 504 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 BLKP51451 505 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 EEFSECP57772 596 aaKnown RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 CYP4F2P78329 520 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ZXDAP98168 799 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ZNF33BQ06732 778 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 APOFQ13790 326 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 NFYCQ13952 458 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 FZD2Q14332 565 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PTGR1Q14914 329 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 TLR1Q15399 786 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SF1Q15637 639 aaKnown RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 AASDHQ4L235 1098 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 TIGD2Q4W5G0 525 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 MTX3Q5HYI7 312 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 RNF220Q5VTB9 566 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 FOXB2Q5VYV0 432 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ADNP2Q6IQ32 1131 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ABRAXAS1Q6UWZ7 409 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 TMIGD1Q6UXZ0 262 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 WASH2PQ6VEQ5 465 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ERMP1Q7Z2K6 904 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SPATA24Q86W54 205 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PARGQ86W56 976 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 AMIGO1Q86WK6 493 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 DCP2Q8IU60 420 aaKnown RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SYT12Q8IV01 421 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 CHERPQ8IWX8 916 aaKnown RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 FAM9CQ8IZT9 166 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 DPP10Q8N608 796 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 MFSD2AQ8NA29 543 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 LINC01555Q8NAE3 123 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PAPD5Q8NDF8 572 aaKnown RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ZNF740Q8NDX6 193 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 CADM4Q8NFZ8 388 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 OR4E2Q8NGC2 313 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 WDR20Q8TBZ3 569 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 VPS33AQ96AX1 596 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 WDR34Q96EX3 536 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 TEX37Q96LM6 180 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PRAP1Q96NZ9 151 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 TSSK3Q96PN8 268 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PKP2Q99959 881 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PCED1AQ9H1Q7 454 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SPNS1Q9H2V7 528 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SRMSQ9H3Y6 488 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 EHD1Q9H4M9 534 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 KIR3DX1Q9H7L2 352 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 BRF2Q9HAW0 419 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 MRPS30Q9NP92 439 aaKnown RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 WASH6PQ9NQA3 447 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PAPOLBQ9NRJ5 636 aaKnown RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 CCM2LQ9NUG4 571 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 CUEDC1Q9NWM3 386 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ASIC5Q9NY37 505 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 TAAR2Q9P1P5 351 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ACTR3BQ9P1U1 418 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 ZNF624Q9P2J8 865 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 APOBEC3BQ9UH17 382 aaKnown RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 LEF1Q9UJU2 399 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-219ENST00000641513 PACSIN3Q9UKS6 424 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 TMED5Q9Y3A6 229 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 SLCO1B1Q9Y6L6 691 aa8.51□□□□□ -1.05
PHGDH-219ENST00000641513 GON4LQ3T8J9 2241 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 A0A1W2PPV9 198 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 FEZF1A0PJY2 475 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 SERTM1A2A2V5 107 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PRR19A6NJB7 356 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 ENO4A6NNW6 628 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 B4DGG1 531 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 C10orf142B7Z368 130 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 TLR4O00206 839 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 SAP18O00422 153 aaKnown RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 AKAP10O43572 662 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 OR1F1O43749 312 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 LRATO95237 230 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 CCNDBP1O95273 360 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 TGFB1P01137 390 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 CELA2BP08218 269 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 BCKDHBP21953 392 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PRPH2P23942 346 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 IL12AP29459 219 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 CMPK1P30085 196 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 GRK3P35626 688 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 SLC19A1P41440 591 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PPM1FP49593 454 aaPredicted RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 ERFP50548 548 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 SLC7A2P52569 658 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 HNRNPFP52597 415 aaKnown RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 DGKQP52824 942 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 NR1H2P55055 460 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 YBX1P67809 324 aaKnown RBP8.5□□□□□ -1.05
PHGDH-219ENST00000641513 TUBA4AP68366 448 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PLIN5Q00G26 463 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 PCDH1Q08174 1060 aa8.5□□□□□ -1.05
PHGDH-219ENST00000641513 DMWDQ09019 674 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms