RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.42■□□□□ 0.22
PHGDH-211ENST00000641213 ZFP90Q8TF47 636 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 ISOC1Q96CN7 298 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 HDAC8Q9BY41 377 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 PRSS16Q9NQE7 514 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 CCDC177Q9NQR7 707 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-211ENST00000641213 SH3BP4Q9P0V3 963 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 ATP6V1HQ9UI12 483 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 C3orf18Q9UK00 162 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 GMEB1Q9Y692 573 aa16.42■□□□□ 0.22
PHGDH-211ENST00000641213 DOCK8Q8NF50 2099 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 TGFB1P01137 390 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 NUDT7P0C024 238 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 EN2P19622 333 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 POLR2IP36954 125 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 OPRD1P41143 372 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 ZNF763Q0D2J5 394 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 CNTN1Q12860 1018 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 GAB1Q13480 694 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 BIRC2Q13490 618 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 VEZF1Q14119 521 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 RBM48Q5RL73 367 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 FAM109BQ6ICB4 259 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 OR2T5Q6IEZ7 315 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 ZNF773Q6PK81 442 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 UNC5DQ6UXZ4 953 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 CBLL1Q75N03 491 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 EIF3MQ7L2H7 374 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 COMMD6Q7Z4G1 85 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 VTCN1Q7Z7D3 282 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 DSG4Q86SJ6 1040 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 OR2T29Q8NH02 315 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 HDAC2Q92769 488 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 CXorf40BQ96DE9 158 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 COX14Q96I36 57 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 SPATA9Q9BWV2 254 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 MTIF3Q9H2K0 278 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 CXorf21Q9HAI6 301 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 EBF1Q9UH73 591 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 HCN2Q9UL51 889 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 LOC100130705A0A1B0GUX0 176 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 C1QTNF3-AMACRE9PGA6 284 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 ZNF701M0R085 212 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 SAP18O00422 153 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 RNASET2O00584 256 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 GBAP04062 536 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 EPHX1P07099 455 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 IL7RP16871 459 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 PPIBP23284 216 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 FCARP24071 287 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 EEF1B2P24534 225 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 PDGFRLQ15198 375 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 RGNQ15493 299 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 TMEM26Q6ZUK4 368 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 GET4Q7L5D6 327 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 WDR48Q8TAF3 677 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 SETD7Q8WTS6 366 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 IL17FQ96PD4 163 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 BARD1Q99728 777 aaKnown RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 BHLHE41Q9C0J9 482 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-211ENST00000641213 OR51B5Q9H339 312 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 REEP4Q9H6H4 257 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 TM9SF3Q9HD45 589 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 VPS4AQ9UN37 437 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 CDC14AQ9UNH5 594 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 CORO2BQ9UQ03 480 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 ASF1AQ9Y294 204 aa16.41■□□□□ 0.22
PHGDH-211ENST00000641213 CDH23Q9H251 3354 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 hCG_2039718K7EN88 272 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 FABP3P05413 133 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 CRHBPP24387 322 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 TTKP33981 857 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 TPD52P55327 224 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-211ENST00000641213 VLDLRP98155 873 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 RFX4Q33E94 735 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 ZC3H12BQ5HYM0 836 aaKnown RBP16.4■□□□□ 0.22
PHGDH-211ENST00000641213 PIP5KL1Q5T9C9 394 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 TANGO2Q6ICL3 276 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 ADAMTSL4Q6UY14 1074 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 CEP68Q76N32 757 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 PDZD3Q86UT5 571 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 ZNF740Q8NDX6 193 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 CHDHQ8NE62 594 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-211ENST00000641213 OR4A15Q8NGL6 344 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 OR5AR1Q8NGP9 310 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 RAB7BQ96AH8 199 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 HSH2DQ96JZ2 352 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 GABARAPL1Q9H0R8 117 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 ADNPQ9H2P0 1102 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 SFXN1Q9H9B4 322 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 THAP10Q9P2Z0 257 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-211ENST00000641213 PLAGL1Q9UM63 463 aa16.4■□□□□ 0.22
PHGDH-211ENST00000641213 PI15O43692 258 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 KLHL18O94889 574 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 ABCB1P08183 1280 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-211ENST00000641213 RAD23AP54725 363 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 LRRC74AQ0VAA2 488 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 NEDD8Q15843 81 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 MEP1AQ16819 746 aa16.39■□□□□ 0.21
PHGDH-211ENST00000641213 DUSP6Q16828 381 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms