RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	HTR3C	Q8WXA8	447 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	USP13	Q92995	863 aa	Predicted RBP	7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	MTFMT	Q96DP5	389 aa	Known RBP	7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	C19orf60	Q96EN9	201 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	MYEOV	Q96EZ4	313 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	ZNF419	Q96HQ0	510 aa	Predicted RBP	7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	LINC00052	Q96N35	136 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	DEFB118	Q96PH6	123 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	PKP4	Q99569	1192 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	TCF25	Q9BQ70	676 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	ACBD6	Q9BR61	282 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	DHRS4	Q9BTZ2	278 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	ASPSCR1	Q9BZE9	553 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	NUAK2	Q9H093	628 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	FAM83D	Q9H4H8	585 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	SPACA1	Q9HBV2	294 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	GLOD4	Q9HC38	313 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	CSNK1G1	Q9HCP0	422 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	TLR9	Q9NR96	1032 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	NUFIP1	Q9UHK0	495 aa	Known RBP	7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	PURG	Q9UJV8	347 aa	Known RBP	7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	FBXW11	Q9UKB1	542 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	MGAT4B	Q9UQ53	548 aa		7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	RUVBL2	Q9Y230	463 aa	Known RBP	7.72	□□□□□ -1.17
RTTN-223	ENST00000640931	FRMPD3	Q5JV73	1810 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	TRBV23OR9-2	A0A075B6M9	112 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	TTC24	A2A3L6	582 aa	Predicted RBP	7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	DLGAP1	O14490	977 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	SOCS2	O14508	198 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	TNFRSF10B	O14763	440 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	PCDHGA12	O60330	932 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	SNN	O75324	88 aa	Predicted RBP	7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	PAGE1	O75459	146 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	LYPLA1	O75608	230 aa	Predicted RBP	7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	LRIG2	O94898	1065 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	RAB3D	O95716	219 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	GP1BA	P07359	652 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	HMBS	P08397	361 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	CSH1	P0DML2	217 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	CSH2	P0DML3	217 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	CD1E	P15812	388 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	SPI1	P17947	270 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	ITGB8	P26012	769 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	PCSK1	P29120	753 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	RORA	P35398	523 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	ETV6	P41212	452 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	KCNC1	P48547	511 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC11A1	P49279	550 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	CASP9	P55211	416 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	YWHAH	Q04917	246 aa	Predicted RBP	7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	FGL1	Q08830	312 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	PRKG2	Q13237	762 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	AAK1	Q2M2I8	961 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	ZIK1	Q3SY52	487 aa	Predicted RBP	7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	TEX44	Q53QW1	395 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	COLEC12	Q5KU26	742 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	LRRC66	Q68CR7	880 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	DENND5A	Q6IQ26	1287 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	PRSS55	Q6UWB4	352 aa	Predicted RBP	7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	GLB1L	Q6UWU2	654 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC24A5	Q71RS6	500 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	NECAB2	Q7Z6G3	386 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	DPPA2	Q7Z7J5	298 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	NLGN4X	Q8N0W4	816 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	PGAM4	Q8N0Y7	254 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	DHRSX	Q8N5I4	330 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	YIPF7	Q8N8F6	280 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	PNPLA1	Q8N8W4	532 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	GDPD1	Q8N9F7	314 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	RTP4	Q96DX8	246 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	RNF145	Q96MT1	663 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	CAMK1G	Q96NX5	476 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	COLEC11	Q9BWP8	271 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	UNKL	Q9H9P5	680 aa	Known RBP	7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	MARCH5	Q9NX47	278 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	MPP6	Q9NZW5	540 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	PAK5	Q9P286	719 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	RCOR3	Q9P2K3	495 aa	Predicted RBP	7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	KIF25	Q9UIL4	384 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	OSGIN1	Q9UJX0	560 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	MGAT4A	Q9UM21	535 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	KCNMB2	Q9Y691	235 aa		7.71	□□□□□ -1.17
RTTN-223	ENST00000640931	SCN5A	Q14524	2016 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	NLRC5	Q86WI3	1866 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	ANKDD1B	A6NHY2	528 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	TMEM210	A6NLX4	147 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	HSBP1L1	C9JCN9	74 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931		H7C0S8	307 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	TADA2A	O75478	443 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	RASAL1	O95294	804 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	MT-ND3	P03897	115 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	CKMT1A	P12532	417 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	TPH1	P17752	444 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	CTPS1	P17812	591 aa		7.71	□□□□□ -1.18
RTTN-223	ENST00000640931	NFKB1	P19838	968 aa		7.71	□□□□□ -1.18

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