RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 SSTR1P30872 391 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 GLRBP48167 497 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 AP2B1P63010 937 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 CDKL1Q00532 357 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 MEF2AQ02078 507 aaPredicted RBP23.86■■□□□ 1.41
VEGFA-232ENST00000640653 SRSF1Q07955 248 aaKnown RBP eCLIP23.86■■□□□ 1.411e-7■■■□□ 14.7
VEGFA-232ENST00000640653 MFAP5Q13361 173 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 CRB2Q5IJ48 1285 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 FHL5Q5TD97 284 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 MFSD4BQ5TF39 518 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 SYT10Q6XYQ8 523 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 FRA10AC1Q70Z53 315 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 ADAMTSL2Q86TH1 951 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 DNAJB14Q8TBM8 379 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 C19orf60Q96EN9 201 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 EGFL8Q99944 293 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 MCMBPQ9BTE3 642 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 ZNF700Q9H0M5 742 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 SMYD2Q9NRG4 433 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 GRHL1Q9NZI5 618 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 HCN3Q9P1Z3 774 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 OARD1Q9Y530 152 aa23.86■■□□□ 1.41
VEGFA-232ENST00000640653 COPG1Q9Y678 874 aaKnown RBP23.86■■□□□ 1.41
VEGFA-232ENST00000640653 TCP11X1B4DZS4 312 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 SGK494L7N484 410 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 NDUFS4O43181 175 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 SERPINA7P05543 415 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 ICAM2P13598 275 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 XCR1P46094 333 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 HNMTP50135 292 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 POU4F1Q01851 419 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 CAV1Q03135 178 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 PWP1Q13610 501 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 HERC3Q15034 1050 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 MINDY4Q4G0A6 757 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 LINC00696Q6ZRV3 163 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 RIPOR1Q6ZS17 1223 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 THOC6Q86W42 341 aaKnown RBP23.85■■□□□ 1.41
VEGFA-232ENST00000640653 CEP97Q8IW35 865 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 C17orf53Q8N3J3 647 aaPredicted RBP23.85■■□□□ 1.41
VEGFA-232ENST00000640653 NEIL2Q969S2 332 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 TSPAN17Q96FV3 270 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 VN1R1Q9GZP7 353 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 RAB17Q9H0T7 212 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 ASF1BQ9NVP2 202 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 CTNNAL1Q9UBT7 734 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 C19orf25Q9UFG5 118 aaPredicted RBP23.85■■□□□ 1.41
VEGFA-232ENST00000640653 CSAG2Q9Y5P2 127 aa23.85■■□□□ 1.41
VEGFA-232ENST00000640653 UQCRHP07919 91 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 SKP1P63208 163 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 RGS1Q08116 209 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 PCOLCEQ15113 449 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 CATSPEREQ5SY80 951 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 CYS1Q717R9 158 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 ANKRD49Q8WVL7 239 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 CNDP1Q96KN2 507 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 TSNARE1Q96NA8 513 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 CPNE1Q99829 537 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 TUBB6Q9BUF5 446 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 PHACTR1Q9C0D0 580 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 PELI2Q9HAT8 420 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 NAALAD2Q9Y3Q0 740 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 KCNE2Q9Y6J6 123 aa23.84■■□□□ 1.41
VEGFA-232ENST00000640653 SETXQ7Z333 2677 aaKnown RBP23.83■■□□□ 1.41
VEGFA-232ENST00000640653 NBASA2RRP1 2371 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 RDH16O75452 317 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 JRKO75564 520 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 PIAS1O75925 651 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 WFS1O76024 890 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 KLHL18O94889 574 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 SERPIND1P05546 499 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 GSTA2P09210 222 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 ZNF169Q14929 603 aaPredicted RBP23.83■■□□□ 1.41
VEGFA-232ENST00000640653 TLR1Q15399 786 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 TSNQ15631 228 aaKnown RBP23.83■■□□□ 1.41
VEGFA-232ENST00000640653 B3GNTL1Q67FW5 361 aaPredicted RBP23.83■■□□□ 1.41
VEGFA-232ENST00000640653 NIPAL1Q6NVV3 410 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 C3orf62Q6ZUJ4 267 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 PDSS2Q86YH6 399 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 BRIX1Q8TDN6 353 aaKnown RBP23.83■■□□□ 1.41
VEGFA-232ENST00000640653 CYTH2Q99418 400 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 AIF1LQ9BQI0 150 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 PTGFRNQ9P2B2 879 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 ZFP69BQ9UJL9 534 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 SLC22A14Q9Y267 594 aa23.83■■□□□ 1.41
VEGFA-232ENST00000640653 MTO1Q9Y2Z2 717 aaKnown RBP23.83■■□□□ 1.41
VEGFA-232ENST00000640653 TCRBV9S1A1TA0A576 114 aa23.82■■□□□ 1.4
VEGFA-232ENST00000640653 CXorf49A8MYA2 514 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-232ENST00000640653 AGFG2O95081 481 aa23.82■■□□□ 1.4
VEGFA-232ENST00000640653 IL10P22301 178 aa23.82■■□□□ 1.4
VEGFA-232ENST00000640653 AHRP35869 848 aa23.82■■□□□ 1.4
VEGFA-232ENST00000640653 TSFMP43897 325 aaKnown RBP23.82■■□□□ 1.4
VEGFA-232ENST00000640653 SCTRP47872 440 aa23.82■■□□□ 1.4
VEGFA-232ENST00000640653 PLTPP55058 493 aa23.82■■□□□ 1.4
VEGFA-232ENST00000640653 REEP5Q00765 189 aa23.82■■□□□ 1.4
VEGFA-232ENST00000640653 MRPL49Q13405 166 aaKnown RBP23.82■■□□□ 1.4
VEGFA-232ENST00000640653 USP10Q14694 798 aaKnown RBP23.82■■□□□ 1.4
VEGFA-232ENST00000640653 TMPRSS11BQ86T26 416 aa23.82■■□□□ 1.4
VEGFA-232ENST00000640653 ZNF740Q8NDX6 193 aa23.82■■□□□ 1.4
VEGFA-232ENST00000640653 NT5CQ8TCD5 201 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms