RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 KLC3Q6P597 504 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 SH2D5Q6ZV89 423 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 LRRC70Q7Z2Q7 622 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 EXD3Q8N9H8 876 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 CAMKVQ8NCB2 501 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 EPS8L3Q8TE67 593 aaKnown RBP25.37■■□□□ 1.65
VEGFA-231ENST00000640499 FKBP10Q96AY3 582 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 UBL7Q96S82 380 aaPredicted RBP25.37■■□□□ 1.65
VEGFA-231ENST00000640499 AIF1LQ9BQI0 150 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 COPG2Q9UBF2 871 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 XPR1Q9UBH6 696 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 ZFP69BQ9UJL9 534 aa25.37■■□□□ 1.65
VEGFA-231ENST00000640499 ZNF490Q9ULM2 529 aaPredicted RBP25.37■■□□□ 1.65
VEGFA-231ENST00000640499 SCN3AQ9NY46 2000 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 FFAR3O14843 346 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 GPR42O15529 346 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 ALBP02768 609 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 AHRP35869 848 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 SLCO1A2P46721 670 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 TDRPQ86YL5 185 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 SNX31Q8N9S9 440 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 OR2Y1Q8NGV0 311 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 OR2W6PQ8NHA6 318 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 NT5CQ8TCD5 201 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 CREB3L4Q8TEY5 395 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 CAVIN3Q969G5 261 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 MVB12AQ96EY5 273 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 SPSB2Q99619 263 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 C17orf62Q9BQA9 187 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 CCDC77Q9BR77 488 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 TMEM216Q9P0N5 145 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 GPN3Q9UHW5 284 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-231ENST00000640499 RAB21Q9UL25 225 aa25.36■■□□□ 1.65
VEGFA-231ENST00000640499 PTRH2Q9Y3E5 179 aaKnown RBP25.36■■□□□ 1.65
VEGFA-231ENST00000640499 ATRXP46100 2492 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 IQANK1A0A1B0GTG1 560 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 GOLGA8RI6L899 631 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 K7EPI3 171 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 ATXN7O15265 892 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-231ENST00000640499 WFS1O76024 890 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 SIX3O95343 332 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-231ENST00000640499 RBP1P09455 135 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 ALDH18A1P54886 795 aaKnown RBP25.35■■□□□ 1.65
VEGFA-231ENST00000640499 PCDH1Q08174 1060 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 DOC2AQ14183 400 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 SLBPQ14493 270 aaKnown RBP eCLIP25.35■■□□□ 1.65
VEGFA-231ENST00000640499 TSNAXIP1Q2TAA8 658 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 ADNP2Q6IQ32 1131 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 VN1R5Q7Z5H4 357 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 PDSS2Q86YH6 399 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 AFAP1L2Q8N4X5 818 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 OR9A4Q8NGU2 314 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 COL26A1Q96A83 441 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 CATSPER2Q96P56 530 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 CAPS2Q9BXY5 557 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 DRC3Q9H069 523 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 EHD1Q9H4M9 534 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 CPSF2Q9P2I0 782 aaKnown RBP25.35■■□□□ 1.65
VEGFA-231ENST00000640499 KCNMB2Q9Y691 235 aa25.35■■□□□ 1.65
VEGFA-231ENST00000640499 IGLV3-12A0A075B6K2 115 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 TK2O00142 265 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 TBX6O95947 436 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-231ENST00000640499 PIM1P11309 404 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-231ENST00000640499 CASP2P42575 452 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 PWP1Q13610 501 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 RASA2Q15283 850 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 RBBP5Q15291 538 aaKnown RBP25.34■■□□□ 1.65
VEGFA-231ENST00000640499 PCBP2Q15366 365 aaKnown RBP eCLIP25.34■■□□□ 1.651e-10■■□□□ 11.4
VEGFA-231ENST00000640499 SYT16Q17RD7 645 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 EMBQ6PCB8 327 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 BORAQ6PGQ7 559 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.34■■□□□ 1.651e-6■■■■■ 40.2
VEGFA-231ENST00000640499 ZCCHC10Q8TBK6 192 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 NT5DC2Q9H857 520 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 WDR54Q9H977 334 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 PIEZO2Q9H5I5 2752 aa25.34■■□□□ 1.65
VEGFA-231ENST00000640499 CLGNO14967 610 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 NDUFS4O43181 175 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 DNAJB6O75190 326 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 B3GALT4O96024 378 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 PYGBP11216 843 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 GFAPP14136 432 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 MAT1AQ00266 395 aaKnown RBP25.33■■□□□ 1.65
VEGFA-231ENST00000640499 DSG2Q14126 1118 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 VWA2Q5GFL6 755 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 SHISA6Q6ZSJ9 500 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 LAPTM4BQ86VI4 370 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 PTGR2Q8N8N7 351 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-231ENST00000640499 STT3BQ8TCJ2 826 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 MMABQ96EY8 250 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-231ENST00000640499 WBP1Q96G27 269 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 SCYL1Q96KG9 808 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 MRPL57Q9BQC6 102 aaKnown RBP25.33■■□□□ 1.65
VEGFA-231ENST00000640499 SEMA4CQ9C0C4 833 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 SLC6A16Q9GZN6 736 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 KLHL31Q9H511 634 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 OPTCQ9UBM4 332 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 CDC14AQ9UNH5 594 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 POLHQ9Y253 713 aa25.33■■□□□ 1.65
VEGFA-231ENST00000640499 PADI2Q9Y2J8 665 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms