RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 SLC6A6P31641 620 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 CHRNA7P36544 502 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 BMXP51813 675 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 CDH13P55290 713 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 B3GALT5-AS1P59052 145 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 IRX1P78414 480 aaPredicted RBP2.81□□□□□ -1.96
ATM-230ENST00000640388 POU5F1Q01860 360 aaKnown RBP2.81□□□□□ -1.96
ATM-230ENST00000640388 NUCB1Q02818 461 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 STK4Q13043 487 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 VGLL4Q14135 290 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 LY6DQ14210 128 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 PHLDA2Q53GA4 152 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 ADAMTSL4-AS1Q5T5F5 129 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 TMEM211Q6ICI0 200 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 PWWP2BQ6NUJ5 590 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 KRT77Q7Z794 578 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 APOBEC3FQ8IUX4 373 aaKnown RBP2.81□□□□□ -1.96
ATM-230ENST00000640388 TMEM139Q8IV31 216 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 ZNF611Q8N823 705 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 TMEM178AQ8NBL3 297 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 MRGPRDQ8TDS7 321 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 UBE2Q2Q8WVN8 375 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 HPSE2Q8WWQ2 592 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 PRPF31Q8WWY3 499 aaKnown RBP2.81□□□□□ -1.96
ATM-230ENST00000640388 IRGQQ8WZA9 623 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 SUSD6Q92537 303 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 ZNF653Q96CK0 615 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 WBP1Q96G27 269 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 ZNF599Q96NL3 588 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 MS4A10Q96PG2 267 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 MXD3Q9BW11 206 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 CCDC68Q9H2F9 335 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 SDR39U1Q9NRG7 319 aaPredicted RBP2.81□□□□□ -1.96
ATM-230ENST00000640388 ATAD3AQ9NVI7 634 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 MRPL15Q9P015 296 aaKnown RBP2.81□□□□□ -1.96
ATM-230ENST00000640388 B3GAT1Q9P2W7 334 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 ZDHHC2Q9UIJ5 367 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 RASAL2Q9UJF2 1139 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 WBP11Q9Y2W2 641 aaKnown RBP2.81□□□□□ -1.96
ATM-230ENST00000640388 CCDC168Q8NDH2 2452 aa2.81□□□□□ -1.96
ATM-230ENST00000640388 NBEAL2Q6ZNJ1 2754 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 IGHV4-4A0A075B6R2 117 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 A0A087WW49 117 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 MEIS2O14770 477 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 IPO8O15397 1037 aaKnown RBP2.8□□□□□ -1.96
ATM-230ENST00000640388 OR10H2O60403 315 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 CDC123O75794 336 aaPredicted RBP2.8□□□□□ -1.96
ATM-230ENST00000640388 AP2A2O94973 939 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 WDPCPO95876 746 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 TIMP1P01033 207 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 OR2T7P0C7T2 308 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 SLC9A3P48764 834 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 CLK1P49759 484 aaKnown RBP2.8□□□□□ -1.96
ATM-230ENST00000640388 CSRP3P50461 194 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 FAM133BQ5BKY9 247 aaKnown RBP2.8□□□□□ -1.96
ATM-230ENST00000640388 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 RNASEH2BQ5TBB1 312 aaKnown RBP2.8□□□□□ -1.96
ATM-230ENST00000640388 ANKRD23Q86SG2 305 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 PIGZQ86VD9 579 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 CDK20Q8IZL9 346 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 OR8H2Q8N162 312 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 SCML4Q8N228 414 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 MINDY1Q8N5J2 469 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 OR2T11Q8NH01 316 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 OR4C3Q8NH37 302 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 OR2T6Q8NHC8 308 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 EXD1Q8NHP7 514 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 PTERQ96BW5 349 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 TMCO6Q96DC7 493 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 NUDT16L1Q9BRJ7 211 aaKnown RBP2.8□□□□□ -1.96
ATM-230ENST00000640388 NUP85Q9BW27 656 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 DEFB129Q9H1M3 183 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 OPA3Q9H6K4 179 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 SLC35C2Q9NQQ7 365 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.8□□□□□ -1.96
ATM-230ENST00000640388 PLCXD1Q9NUJ7 323 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 ZNF701Q9NV72 531 aaPredicted RBP2.8□□□□□ -1.96
ATM-230ENST00000640388 CACNG4Q9UBN1 327 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 RYR3Q15413 4870 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 FLNCQ14315 2725 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 USP9YO00507 2555 aaPredicted RBP2.8□□□□□ -1.96
ATM-230ENST00000640388 NOTCH1P46531 2555 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 JMJD1CQ15652 2540 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 MED13LQ71F56 2210 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 BIRC6Q9NR09 4857 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 RALGAPA1Q6GYQ0 2036 aa2.8□□□□□ -1.96
ATM-230ENST00000640388 TDRD15B5MCY1 1934 aaKnown RBP2.8□□□□□ -1.96
ATM-230ENST00000640388 LAMA1P25391 3075 aa2.79□□□□□ -1.96
ATM-230ENST00000640388 AKAP9Q99996 3911 aa2.79□□□□□ -1.96
ATM-230ENST00000640388 HIVEP1P15822 2718 aa2.79□□□□□ -1.96
ATM-230ENST00000640388 FLNAP21333 2647 aaKnown RBP2.79□□□□□ -1.96
ATM-230ENST00000640388 EDC4Q6P2E9 1401 aaKnown RBP2.79□□□□□ -1.96
ATM-230ENST00000640388 KTN1Q86UP2 1357 aaKnown RBP2.79□□□□□ -1.96
ATM-230ENST00000640388 SVILO95425 2214 aa2.79□□□□□ -1.96
ATM-230ENST00000640388 ABCC4O15439 1325 aa2.79□□□□□ -1.96
ATM-230ENST00000640388 ANKRD61A6NGH8 418 aa2.79□□□□□ -1.96
ATM-230ENST00000640388 SLCO1B7G3V0H7 640 aa2.79□□□□□ -1.96
ATM-230ENST00000640388 ARHGEF9O43307 516 aa2.79□□□□□ -1.96
ATM-230ENST00000640388 PLOD3O60568 738 aa2.79□□□□□ -1.96
ATM-230ENST00000640388 KINO60870 393 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms