RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 TXNDC8Q6A555 127 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ZNF783Q6ZMS7 281 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 TWIST2Q8WVJ9 160 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 NXPE3Q969Y0 559 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 KCNC2Q96PR1 638 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 EURLQ9NYK6 297 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 FNIP2Q9P278 1114 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ZNF175Q9Y473 711 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 TCAF1Q9Y4C2 921 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 PCDHGA8Q9Y5G5 932 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 CFAP20Q9Y6A4 193 aaKnown RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 RICTORQ6R327 1708 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ARFGEF2Q9Y6D5 1785 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ARID1BQ8NFD5 2236 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 B8ZZF3 427 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 E7ENX8 843 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 HDAC3O15379 428 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 NOS1APO75052 506 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 KCNK5O95279 499 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 IGFBP5P24593 272 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 GABRB2P47870 512 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 VEGFBP49765 207 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 TAP2Q03519 686 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ZNF234Q14588 700 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 GRM7Q14831 915 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ENPP6Q6UWR7 440 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 DPY19L3Q6ZPD9 716 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 CROCCP3Q8IVE0 287 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 FBXO25Q8TCJ0 367 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 SAP130Q9H0E3 1048 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 EPHX3Q9H6B9 360 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 SLC39A1Q9NY26 324 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 NLGN3Q9NZ94 848 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 KLHL13Q9P2N7 655 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 MED1Q15648 1581 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 MAGEA2P43356 314 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 PSME3P61289 254 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 RPP30P78346 268 aaKnown RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 LCP2Q13094 533 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 LINGO2Q7L985 606 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 SPATA6LQ8N4H0 392 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 OR9A1PQ8NGU1 263 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 EPS8L1Q8TE68 723 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 DIO2Q92813 273 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 SPTSSAQ969W0 71 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 RELTQ969Z4 430 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 DENND2DQ9H6A0 471 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 LRRC4CQ9HCJ2 640 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 C11orf16Q9NQ32 467 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 CAMK2AQ9UQM7 478 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 PEAK1Q9H792 1746 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 MEN1O00255 615 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 GABBR2O75899 941 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 GJA9P57773 515 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ZIK1Q3SY52 487 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 JAGN1Q8N5M9 183 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ZNF283Q8N7M2 679 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 THAP3Q8WTV1 239 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 BRI3BPQ8WY22 251 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 INPP4AQ96PE3 977 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 COPS4Q9BT78 406 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 A0A0U1RQF3 1178 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 A0A1W2PRB8 838 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ATE1O95260 518 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ADRB2P07550 413 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 IQCF3P0C7M6 154 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 RNH1P13489 461 aaKnown RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 GSTM3P21266 225 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ABCG1P45844 678 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 CLCA4Q14CN2 919 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 C10orf62Q5T681 223 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 CDKAL1Q5VV42 579 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 TIGD4Q8IY51 512 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 UBQLNLQ8IYU4 475 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 SLC5A11Q8WWX8 675 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 HOXB13Q92826 284 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 SLC35A5Q9BS91 424 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 TMEM9Q9P0T7 183 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 VPS29Q9UBQ0 182 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 DNAJB11Q9UBS4 358 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 EPHA6Q9UF33 1036 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 BOKQ9UMX3 212 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 TMED5Q9Y3A6 229 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 ST14Q9Y5Y6 855 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 KLRG2A4D1S0 409 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 CAPN8A6NHC0 703 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 BHMG1C9JSJ3 638 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 PRAMEF26H0Y7S4 382 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 K7EPI3 171 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 MID1O15344 667 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 GADD45GO95257 159 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 THEGLP0DJG4 465 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 NR0B1P51843 470 aaKnown RBP5.95□□□□□ -1.46
SCN1A-217ENST00000637988 E2F1Q01094 437 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 HHEXQ03014 270 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 PDE7AQ13946 482 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 STK11Q15831 433 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 PRAMEF17Q5VTA0 474 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 RTL10Q7L3V2 364 aa5.95□□□□□ -1.46
SCN1A-217ENST00000637988 RPLP0P6Q8NHW5 317 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms