RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 GFRALQ6UXV0 394 aa17.43■□□□□ 0.38
CLN6-220ENST00000637450 ANKRD37Q7Z713 158 aa17.43■□□□□ 0.38
CLN6-220ENST00000637450 ASPGQ86U10 573 aa17.43■□□□□ 0.38
CLN6-220ENST00000637450 SLC26A11Q86WA9 606 aa17.43■□□□□ 0.38
CLN6-220ENST00000637450 PDSS2Q86YH6 399 aa17.43■□□□□ 0.38
CLN6-220ENST00000637450 ANKHQ9HCJ1 492 aa17.43■□□□□ 0.38
CLN6-220ENST00000637450 ENTPD4Q9Y227 616 aa17.43■□□□□ 0.38
CLN6-220ENST00000637450 CROCCQ5TZA2 2017 aa17.43■□□□□ 0.38
CLN6-220ENST00000637450 A8MUI8 341 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 TTC4O95801 387 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 CDH1P12830 882 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 MST1P26927 711 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 GRK3P35626 688 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 AGTR2P50052 363 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 DHX9Q08211 1270 aaKnown RBP17.42■□□□□ 0.38
CLN6-220ENST00000637450 PHKG1Q16816 387 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 ZXDCQ2QGD7 858 aaPredicted RBP17.42■□□□□ 0.38
CLN6-220ENST00000637450 BTBD16Q32M84 506 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 RBM20Q5T481 1227 aaKnown RBP17.42■□□□□ 0.38
CLN6-220ENST00000637450 SP5Q6BEB4 398 aaPredicted RBP17.42■□□□□ 0.38
CLN6-220ENST00000637450 CNTN4Q8IWV2 1026 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 MYO1HQ8N1T3 1032 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 MFSD9Q8NBP5 474 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 PLPP5Q8NEB5 264 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 GABPB2Q8TAK5 448 aaPredicted RBP17.42■□□□□ 0.38
CLN6-220ENST00000637450 ZCCHC10Q8TBK6 192 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 ALKBH8Q96BT7 664 aaKnown RBP17.42■□□□□ 0.38
CLN6-220ENST00000637450 SLC22A7Q9Y694 548 aa17.42■□□□□ 0.38
CLN6-220ENST00000637450 RDH16O75452 317 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 UNC5CO95185 931 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 TSPAN12O95859 305 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 HIST1H2AGP0C0S8 130 aaPredicted RBP17.41■□□□□ 0.38
CLN6-220ENST00000637450 HIST1H2ADP20671 130 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 SRSF11Q05519 484 aaKnown RBP17.41■□□□□ 0.38
CLN6-220ENST00000637450 MSS51Q4VC12 460 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 SPANXN3Q5MJ09 141 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 ACER2Q5QJU3 275 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 KIAA0408Q6ZU52 694 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 ABHD11Q8NFV4 315 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 OR4K1Q8NGD4 311 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 M1APQ8TC57 530 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 LINGO1Q96FE5 620 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 HIST1H2AHQ96KK5 128 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 ZNF354BQ96LW1 612 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 OSBPL9Q96SU4 736 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 HIST1H2AJQ99878 128 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 HAUS8Q9BT25 410 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 H2AFJQ9BTM1 129 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 SARGQ9BW04 601 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 COPG2Q9UBF2 871 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 NAALAD2Q9Y3Q0 740 aa17.41■□□□□ 0.38
CLN6-220ENST00000637450 GOLGA6L10A0A0M3HER8 536 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 ENO4A6NNW6 628 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 DNALI1O14645 258 aaPredicted RBP17.4■□□□□ 0.38
CLN6-220ENST00000637450 HNRNPRO43390 633 aaKnown RBP17.4■□□□□ 0.38
CLN6-220ENST00000637450 BANF1O75531 89 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 SLC35G6P0C7Q6 338 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 IL10P22301 178 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 CCR8P51685 355 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 IL2P60568 153 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 RHAGQ02094 409 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 PPP1R7Q15435 360 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 EXT1Q16394 746 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 ZNF766Q5HY98 468 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 DUPD1Q68J44 220 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 TMEM207Q6UWW9 146 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 GALNT7Q86SF2 657 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 IGDCC3Q8IVU1 814 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 BEST3Q8N1M1 668 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 AFAP1L2Q8N4X5 818 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 OR56A3Q8NH54 315 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 SNF8Q96H20 258 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 OR1F2PQ96R84 312 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 NAT9Q9BTE0 207 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 MMP25Q9NPA2 562 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 LANCL2Q9NS86 450 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 SEC14L3Q9UDX4 400 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 PCDHGB6Q9Y5F9 930 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 ABCA12Q86UK0 2595 aa17.4■□□□□ 0.38
CLN6-220ENST00000637450 TRGV8A0A0C4DH27 118 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 PWP1Q13610 501 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 TUBA3CQ13748 450 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 HERC3Q15034 1050 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 NSDHLQ15738 373 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.39■□□□□ 0.37
CLN6-220ENST00000637450 SFT2D3Q587I9 215 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 FCRLBQ6BAA4 426 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 TUBA3EQ6PEY2 450 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 SLC35F6Q8N357 371 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 MARVELD3Q96A59 401 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 PYCR2Q96C36 320 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 MOCOSQ96EN8 888 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 PEX11GQ96HA9 241 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 OR4K3Q96R72 315 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 NPAS2Q99743 824 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 KCNK13Q9HB14 408 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 PLAC1Q9HBJ0 212 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 ARL15Q9NXU5 204 aa17.39■□□□□ 0.37
CLN6-220ENST00000637450 MYO7BQ6PIF6 2116 aa17.38■□□□□ 0.37
CLN6-220ENST00000637450 MAGEB17A8MXT2 336 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms