RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SERPIND1P05546 499 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 IVDP26440 423 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 MGAT5Q09328 741 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 HERC3Q15034 1050 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 ABHD17BQ5VST6 288 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 STEAP4Q687X5 459 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 NIPAL1Q6NVV3 410 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 HIBCHQ6NVY1 386 aaPredicted RBP16.96■□□□□ 0.31
PNKP-225ENST00000636214 TMEM205Q6UW68 189 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 SLC26A11Q86WA9 606 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 ANKMY2Q8IV38 441 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 OR51Q1Q8NH59 317 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 GRHL3Q8TE85 626 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 FAR1Q8WVX9 515 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 PYCR2Q96C36 320 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 FBXL8Q96CD0 374 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 VPS39Q96JC1 886 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 MACROD1Q9BQ69 325 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 VN1R1Q9GZP7 353 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 OLAHQ9NV23 265 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 NSMCE4AQ9NXX6 385 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 SH2B3Q9UQQ2 575 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 A1L4Q6 167 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 SGK494L7N484 410 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 TTI1O43156 1089 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 NDUFS4O43181 175 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 OR1F1O43749 312 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 RDH16O75452 317 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 JRKO75564 520 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 SEC31AO94979 1220 aaKnown RBP16.95■□□□□ 0.3
PNKP-225ENST00000636214 EDN3P14138 238 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 SOX11P35716 441 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 AGTR2P50052 363 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 PER3P56645 1201 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 RGS1Q08116 209 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 PDIA2Q13087 525 aaKnown RBP16.95■□□□□ 0.3
PNKP-225ENST00000636214 CSHL1Q14406 222 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 PCOLCEQ15113 449 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 TRMT10BQ6PF06 316 aaKnown RBP16.95■□□□□ 0.3
PNKP-225ENST00000636214 FRA10AC1Q70Z53 315 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 CPEB2Q7Z5Q1 589 aaKnown RBP16.95■□□□□ 0.3
PNKP-225ENST00000636214 CREG2Q8IUH2 290 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 NKAPQ8N5F7 415 aaKnown RBP16.95■□□□□ 0.3
PNKP-225ENST00000636214 BBOF1Q8ND07 529 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 FBXO36Q8NEA4 188 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 OR56A3Q8NH54 315 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 PWWP2AQ96N64 755 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 PLA2G3Q9NZ20 509 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 RNF14Q9UBS8 474 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 NTNG1Q9Y2I2 539 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 TEX264Q9Y6I9 313 aa16.95■□□□□ 0.3
PNKP-225ENST00000636214 URADA6NGE7 173 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 USP27XA6NNY8 438 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 SEC24DO94855 1032 aaPredicted RBP16.94■□□□□ 0.3
PNKP-225ENST00000636214 TSPAN12O95859 305 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 ITGAMP11215 1152 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 NPPBP16860 134 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 IL10P22301 178 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 SLC12A2P55011 1212 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 MEF2AQ02078 507 aaPredicted RBP16.94■□□□□ 0.3
PNKP-225ENST00000636214 ACTN3Q08043 901 aaPredicted RBP16.94■□□□□ 0.3
PNKP-225ENST00000636214 ILF2Q12905 390 aaKnown RBP16.94■□□□□ 0.3
PNKP-225ENST00000636214 FRG1Q14331 258 aaKnown RBP16.94■□□□□ 0.3
PNKP-225ENST00000636214 INAQ16352 499 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 BTBD16Q32M84 506 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 RPUSD3Q6P087 351 aaKnown RBP16.94■□□□□ 0.3
PNKP-225ENST00000636214 ABHD13Q7L211 337 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 PRSS41Q7RTY9 318 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 STRA8Q7Z7C7 330 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 KCT2Q8NC54 265 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 CATSPER1Q8NEC5 780 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 SLC5A11Q8WWX8 675 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 CYTH2Q99418 400 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 BARD1Q99728 777 aaKnown RBP16.94■□□□□ 0.3
PNKP-225ENST00000636214 EGFL8Q99944 293 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 ABI3Q9P2A4 366 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 ERRFI1Q9UJM3 462 aaPredicted RBP16.94■□□□□ 0.3
PNKP-225ENST00000636214 NAALAD2Q9Y3Q0 740 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 SLC22A7Q9Y694 548 aa16.94■□□□□ 0.3
PNKP-225ENST00000636214 FAM95CA0A1B0GW59 222 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 TRBC2A0A5B9 178 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 LCMT2O60294 686 aaKnown RBP16.93■□□□□ 0.3
PNKP-225ENST00000636214 CELA2AP08217 269 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 ZNF37AP17032 561 aaPredicted RBP16.93■□□□□ 0.3
PNKP-225ENST00000636214 TNFSF10P50591 281 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 ZNF33BQ06732 778 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 CALCOCO2Q13137 446 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 PWP1Q13610 501 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 ZBED8Q8IZ13 594 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 ABHD11Q8NFV4 315 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 HAS2Q92819 552 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 TM4SF19Q96DZ7 209 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 PDLIM5Q96HC4 596 aaKnown RBP16.93■□□□□ 0.3
PNKP-225ENST00000636214 OR1F2PQ96R84 312 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 KRT12Q99456 494 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 OLFM1Q99784 485 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 AIF1LQ9BQI0 150 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 TXNDC16Q9P2K2 825 aa16.93■□□□□ 0.3
PNKP-225ENST00000636214 ZNF860A6NHJ4 632 aa16.92■□□□□ 0.3
PNKP-225ENST00000636214 A8MUI8 341 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms