RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 THEMIS2Q5TEJ8 643 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 RPS19BP1Q86WX3 136 aaKnown RBP18.92■□□□□ 0.62
TARDBP-228ENST00000629725 MARVELD2Q8N4S9 558 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 TC2NQ8N9U0 490 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 ZNF480Q8WV37 535 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 PRAP1Q96NZ9 151 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 UCK2Q9BZX2 261 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 KCNJ16Q9NPI9 418 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 RAB6BQ9NRW1 208 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 TREX1Q9NSU2 369 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 KCNN3Q9UGI6 736 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 DNHD1Q96M86 4753 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 ACANP16112 2415 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 TCRBV7S2A1N4TA0A589 114 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 FAM90A27PA6NNH2 459 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 H3BMM5 538 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 TFECO14948 347 aaPredicted RBP18.91■□□□□ 0.62
TARDBP-228ENST00000629725 KIF5CO60282 957 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 CDC123O75794 336 aaPredicted RBP18.91■□□□□ 0.62
TARDBP-228ENST00000629725 SLC26A5P58743 744 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 ACSBG2Q5FVE4 666 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 TMEM214Q6NUQ4 689 aaKnown RBP18.91■□□□□ 0.62
TARDBP-228ENST00000629725 VN1R4Q7Z5H5 301 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 UBL4BQ8N7F7 174 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 LRRC57Q8N9N7 239 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 POGLUT1Q8NBL1 392 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 CHDHQ8NE62 594 aaPredicted RBP18.91■□□□□ 0.62
TARDBP-228ENST00000629725 PLPP5Q8NEB5 264 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 NRGNQ92686 78 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 TMEM125Q96AQ2 219 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 MACROD1Q9BQ69 325 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 ANKHQ9HCJ1 492 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 AMFRQ9UKV5 643 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 RNF6Q9Y252 685 aa18.91■□□□□ 0.62
TARDBP-228ENST00000629725 PHF3Q92576 2039 aaKnown RBP18.9■□□□□ 0.62
TARDBP-228ENST00000629725 KCNE1BA0A087WTH5 132 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 TOXO94900 526 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 TPP2P29144 1249 aaPredicted RBP18.9■□□□□ 0.62
TARDBP-228ENST00000629725 SESN2P58004 480 aaPredicted RBP18.9■□□□□ 0.62
TARDBP-228ENST00000629725 RPS15AP62244 130 aaKnown RBP18.9■□□□□ 0.62
TARDBP-228ENST00000629725 CRADDP78560 199 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 RHAGQ02094 409 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 RNF187Q5TA31 235 aaPredicted RBP18.9■□□□□ 0.62
TARDBP-228ENST00000629725 MEI1Q5TIA1 1274 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 MRNIPQ6NTE8 343 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 SDCCAG8Q86SQ7 713 aaPredicted RBP18.9■□□□□ 0.62
TARDBP-228ENST00000629725 TGIF2LYQ8IUE0 185 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 ELP5Q8TE02 316 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 ATG4AQ8WYN0 398 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 LPGAT1Q92604 370 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 RND1Q92730 232 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 FOXC2Q99958 501 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 RBCK1Q9BYM8 510 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 CXXC4Q9H2H0 198 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 TMEM184CQ9NVA4 438 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 GALPQ9UBC7 116 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 PACSIN2Q9UNF0 486 aaPredicted RBP18.9■□□□□ 0.62
TARDBP-228ENST00000629725 CRYL1Q9Y2S2 319 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 HRH3Q9Y5N1 445 aa18.9■□□□□ 0.62
TARDBP-228ENST00000629725 GRID2IPA4D2P6 1211 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 MAGEB17A8MXT2 336 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 PFDN6O15212 129 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 CDC40O60508 579 aaKnown RBP eCLIP18.89■□□□□ 0.615e-6■■□□□ 12.3
TARDBP-228ENST00000629725 RDH16O75452 317 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 SYF2O95926 243 aaKnown RBP18.89■□□□□ 0.61
TARDBP-228ENST00000629725 ESR1P03372 595 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 HOXD4P09016 255 aaPredicted RBP18.89■□□□□ 0.61
TARDBP-228ENST00000629725 NMBRP28336 390 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 OR4D2P58180 307 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 KCNJ11Q14654 390 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 PEX26Q7Z412 305 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 ZNF227Q86WZ6 799 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 KIF2BQ8N4N8 673 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 ZCCHC10Q8TBK6 192 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 TSLPQ969D9 159 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 PEX11GQ96HA9 241 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 PANX2Q96RD6 677 aa18.89■□□□□ 0.61
TARDBP-228ENST00000629725 TP63Q9H3D4 680 aaPredicted RBP18.89■□□□□ 0.61
TARDBP-228ENST00000629725 TRIM45Q9H8W5 580 aaPredicted RBP18.89■□□□□ 0.61
TARDBP-228ENST00000629725 USP27XA6NNY8 438 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 BTNL10A8MVZ5 291 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 E5RI56 91 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 PRMT3O60678 531 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 FAM155BO75949 473 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 ZWINTO95229 277 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 VAPBO95292 243 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 TFEBP19484 476 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 KLK2P20151 261 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 IL10P22301 178 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 HRH2P25021 359 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 MEOX1P50221 254 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 ITGA8P53708 1063 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 ADARP55265 1226 aaKnown RBP18.88■□□□□ 0.61
TARDBP-228ENST00000629725 PPP2R2AP63151 447 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 MYBPHQ13203 477 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 OASLQ15646 514 aaKnown RBP18.88■□□□□ 0.61
TARDBP-228ENST00000629725 TYSND1Q2T9J0 566 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 PRUNE1Q86TP1 453 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 PDSS2Q86YH6 399 aa18.88■□□□□ 0.61
TARDBP-228ENST00000629725 REXO1L1PQ8IX06 675 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms