RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 COL26A1Q96A83 441 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 WBP1Q96G27 269 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 SCYL1Q96KG9 808 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 MRPL57Q9BQC6 102 aaKnown RBP13□□□□□ -0.33
PFDN5-220ENST00000628881 PARD6BQ9BYG5 372 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 PITHD1Q9GZP4 211 aaPredicted RBP13□□□□□ -0.33
PFDN5-220ENST00000628881 SLC26A1Q9H2B4 701 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 WDR54Q9H977 334 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 GEMIN8Q9NWZ8 242 aaKnown RBP13□□□□□ -0.33
PFDN5-220ENST00000628881 CPSF2Q9P2I0 782 aaKnown RBP13□□□□□ -0.33
PFDN5-220ENST00000628881 COPG2Q9UBF2 871 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 OPTCQ9UBM4 332 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 ZFP69BQ9UJL9 534 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 TMCO1Q9UM00 188 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 POLHQ9Y253 713 aa13□□□□□ -0.33
PFDN5-220ENST00000628881 PTRH2Q9Y3E5 179 aaKnown RBP13□□□□□ -0.33
PFDN5-220ENST00000628881 FOXS1O43638 330 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 PRAMEF4O60810 478 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 NUDT17P0C025 328 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 GSTM2P28161 218 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 FOLR3P41439 243 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 SLCO1A2P46721 670 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 AVPR1BP47901 424 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 RGS1Q08116 209 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 DSG2Q14126 1118 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 SLBPQ14493 270 aaKnown RBP eCLIP12.99□□□□□ -0.33
PFDN5-220ENST00000628881 RBBP5Q15291 538 aaKnown RBP12.99□□□□□ -0.33
PFDN5-220ENST00000628881 NKG7Q16617 165 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 DEFB109BQ30KR1 87 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 XKR6Q5GH73 641 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 PRAMEF9Q5VWM5 478 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 METTL2BQ6P1Q9 378 aaKnown RBP12.99□□□□□ -0.33
PFDN5-220ENST00000628881 TMIGD1Q6UXZ0 262 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 ANKRD53Q8N9V6 530 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 KCT2Q8NC54 265 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 TRPV3Q8NET8 790 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 TTLQ8NG68 377 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 NT5CQ8TCD5 201 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 ADAMTS17Q8TE56 1095 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 THAP4Q8WY91 577 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 WDR34Q96EX3 536 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 PTCD3Q96EY7 689 aaKnown RBP12.99□□□□□ -0.33
PFDN5-220ENST00000628881 MMABQ96EY8 250 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-220ENST00000628881 MACROD1Q9BQ69 325 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 MRPL46Q9H2W6 279 aaKnown RBP12.99□□□□□ -0.33
PFDN5-220ENST00000628881 NT5DC2Q9H857 520 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 CTSFQ9UBX1 484 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 NXT1Q9UKK6 140 aaKnown RBP12.99□□□□□ -0.33
PFDN5-220ENST00000628881 RAB21Q9UL25 225 aa12.99□□□□□ -0.33
PFDN5-220ENST00000628881 MRPS2Q9Y399 296 aaKnown RBP12.99□□□□□ -0.33
PFDN5-220ENST00000628881 TNPO3Q9Y5L0 923 aaKnown RBP12.99□□□□□ -0.33
PFDN5-220ENST00000628881 IGLV3-12A0A075B6K2 115 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 A0A0A6YYC8 382 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 VSTM2BA6NLU5 285 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 H0YIG0 161 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 STX16-NPEPL1H3BU86 382 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 I3L1I5 382 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 TK2O00142 265 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 STX16O14662 325 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 ATXN7O15265 892 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 SMIM24O75264 130 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 CDH16O75309 829 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 NSA2O95478 260 aaKnown RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 SERPIND1P05546 499 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 TUBBP07437 444 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 EPB42P16452 691 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 SNRPNP63162 240 aaKnown RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 IRF8Q02556 426 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 OCA2Q04671 838 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 PCDH1Q08174 1060 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 LAPTM5Q13571 262 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 DOC2AQ14183 400 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 E2F2Q14209 437 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 SSPNQ14714 243 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 PCBP2Q15366 365 aaKnown RBP eCLIP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 TBCCQ15814 346 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 LINC00303Q3SY05 128 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 PCSK4Q6UW60 755 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 RAB43Q86YS6 212 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 TEX9Q8N6V9 391 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 PTGR2Q8N8N7 351 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 LSM14AQ8ND56 463 aaKnown RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 ZCCHC10Q8TBK6 192 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 EPS8L3Q8TE67 593 aaKnown RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 MOCOSQ96EN8 888 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 SEC16BQ96JE7 1060 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 SPSB2Q99619 263 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 EFCAB11Q9BUY7 163 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 ANKHQ9HCJ1 492 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 ZNF282Q9UDV7 671 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 RALYQ9UKM9 306 aaKnown RBP12.98□□□□□ -0.33
PFDN5-220ENST00000628881 MAN2B2Q9Y2E5 1009 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 ANGPTL3Q9Y5C1 460 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 SLC22A7Q9Y694 548 aa12.98□□□□□ -0.33
PFDN5-220ENST00000628881 URADA6NGE7 173 aa12.97□□□□□ -0.33
PFDN5-220ENST00000628881 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
PFDN5-220ENST00000628881 GOLGA8RI6L899 631 aa12.97□□□□□ -0.33
PFDN5-220ENST00000628881 WFS1O76024 890 aa12.97□□□□□ -0.33
PFDN5-220ENST00000628881 UMODP07911 640 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms