RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 RNF6Q9Y252 685 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 TESMINQ9Y4I5 508 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 C1orf226A1L170 272 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 TMEM229AB2RXF0 380 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 OPN1SWP03999 348 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 TNFRSF1BP20333 461 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 RXRGP48443 463 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 SFSWAPQ12872 951 aaKnown RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 ANGPTL8Q6UXH0 198 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 LINC00299Q6ZSB3 139 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 FAM124AQ86V42 546 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 PLD3Q8IV08 490 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 P3H2Q8IVL5 708 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 SPPL2AQ8TCT8 520 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 PXYLP1Q8TE99 480 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 PHF10Q8WUB8 498 aaKnown RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 IPCEF1Q8WWN9 437 aaPredicted RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 EPYCQ99645 322 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 SLIRPQ9GZT3 109 aaKnown RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 AMBNQ9NP70 447 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 PRDM8Q9NQV8 689 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 INIPQ9NRY2 104 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 ADPRHL2Q9NX46 363 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 SH3BP4Q9P0V3 963 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 RAPGEFL1Q9UHV5 662 aa10.86□□□□□ -0.67
VARS2-213ENST00000625423 MKI67P46013 3256 aaKnown RBP10.86□□□□□ -0.67
VARS2-213ENST00000625423 TTC34A8MYJ7 566 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 PCDH7O60245 1069 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 GCM2O75603 506 aaPredicted RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 SLCO2B1O94956 709 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 CXCL10P02778 98 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 GSTM1P09488 218 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 C21orf33P30042 268 aaPredicted RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 ETV3P41162 512 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 PREPP48147 710 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 SLC7A9P82251 487 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 FAM43BQ6ZT52 329 aaPredicted RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 TSEN54Q7Z6J9 526 aaKnown RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 PROX1Q92786 737 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 ZHX1-C8orf76Q96EF9 292 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 HRASLS5Q96KN8 279 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 SIGLEC11Q96RL6 698 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 HERC2P3Q9BVR0 1158 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 EMILIN2Q9BXX0 1053 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 STOX2Q9P2F5 926 aaPredicted RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 SLC25A13Q9UJS0 675 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 PAIP2BQ9ULR5 123 aaKnown RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 PCDHGB3Q9Y5G1 929 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 EFCAB9A8MZ26 197 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 IDSP22304 550 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 GRK3P35626 688 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 LIPAP38571 399 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 BDKRB1P46663 353 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 KCNC3Q14003 757 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 PRSS36Q5K4E3 855 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 CATSPEREQ5SY80 951 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 GRHL2Q6ISB3 625 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 GDPD4Q6W3E5 623 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 NEK10Q6ZWH5 1172 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 TMEM25Q86YD3 366 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 NPAS3Q8IXF0 933 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 VPS37AQ8NEZ2 397 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 OR4A15Q8NGL6 344 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 FEVQ99581 238 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 COPS4Q9BT78 406 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 BTNL2Q9UIR0 455 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 GNG14A0A1W2PPG7 69 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 MGAT4DA6NG13 374 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 E9PQ18 207 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 H0YIV9 168 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 GRM6O15303 877 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 TSPAN6O43657 245 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 MRPS14O60783 128 aaKnown RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 PSIP1O75475 530 aaKnown RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 SLC16A8O95907 504 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 CRATP43155 626 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 C21orf58P58505 322 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 ZNF33BQ06732 778 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 SYTL3Q4VX76 610 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 ZNF852Q6ZMS4 543 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 RASGRP3Q8IV61 690 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 OR52J3Q8NH60 311 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 HUS1BQ8NHY5 278 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 STARD8Q92502 1023 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 DOHHQ9BU89 302 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 RIOK2Q9BVS4 552 aaKnown RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 ITPAQ9BY32 194 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 GABARAPL3Q9BY60 117 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 ZBTB20Q9HC78 741 aaPredicted RBP10.85□□□□□ -0.67
VARS2-213ENST00000625423 POLE4Q9NR33 117 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 CCL26Q9Y258 94 aa10.85□□□□□ -0.67
VARS2-213ENST00000625423 TRAV19A0A0A6YYK7 116 aa10.84□□□□□ -0.67
VARS2-213ENST00000625423 FADS2P1A8MWK0 482 aa10.84□□□□□ -0.67
VARS2-213ENST00000625423 TNFRSF11BO00300 401 aa10.84□□□□□ -0.67
VARS2-213ENST00000625423 TGM1P22735 817 aa10.84□□□□□ -0.67
VARS2-213ENST00000625423 HNF4AP41235 474 aa10.84□□□□□ -0.67
VARS2-213ENST00000625423 ASMTP46597 345 aa10.84□□□□□ -0.67
VARS2-213ENST00000625423 OR1E2P47887 323 aa10.84□□□□□ -0.67
VARS2-213ENST00000625423 CLK1P49759 484 aaKnown RBP10.84□□□□□ -0.67
VARS2-213ENST00000625423 CTSCP53634 463 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms