RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PPIAP62937 165 aaKnown RBP12.97□□□□□ -0.33
SNX1-214ENST00000625244 PTK6Q13882 451 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 ITIH4Q14624 930 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 SLC18A3Q16572 532 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 C1orf185Q5T7R7 199 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 DENND5AQ6IQ26 1287 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
SNX1-214ENST00000625244 PRSS57Q6UWY2 283 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 PRSS41Q7RTY9 318 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 TC2NQ8N9U0 490 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 LINC01560Q8TB33 94 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 HMGCLL1Q8TB92 370 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 LKAAEAR1Q8TD35 194 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 TSLPQ969D9 159 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
SNX1-214ENST00000625244 CDKN2AIPNLQ96HQ2 116 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 VAT1Q99536 393 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 ZDHHC11Q9H8X9 412 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 NHEJ1Q9H9Q4 299 aaPredicted RBP12.97□□□□□ -0.33
SNX1-214ENST00000625244 DEPPQ9NTK1 212 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 B4GALT7Q9UBV7 327 aa12.97□□□□□ -0.33
SNX1-214ENST00000625244 A0A087X0T9 212 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 OR14I1A6ND48 311 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 H0YIG0 161 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 STATHP02808 62 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 HRGP04196 525 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 FAM228BP0C875 321 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 CMPK1P30085 196 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 BDKRB1P46663 353 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 ASCL1P50553 236 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 RHAGQ02094 409 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 ABRAXAS2Q15018 415 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 NSDHLQ15738 373 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 RIPPLY2Q5TAB7 128 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 PODNL1Q6PEZ8 512 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 SLC13A5Q86YT5 568 aaPredicted RBP12.96□□□□□ -0.33
SNX1-214ENST00000625244 CTNNBL1Q8WYA6 563 aaPredicted RBP12.96□□□□□ -0.33
SNX1-214ENST00000625244 RERGQ96A58 199 aaPredicted RBP12.96□□□□□ -0.33
SNX1-214ENST00000625244 CNPPD1Q9BV87 410 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 GBA3Q9H227 469 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 NLE1Q9NVX2 485 aaPredicted RBP12.96□□□□□ -0.33
SNX1-214ENST00000625244 CTTNBP2NLQ9P2B4 639 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 TRHDEQ9UKU6 1024 aa12.96□□□□□ -0.33
SNX1-214ENST00000625244 FEZF1A0PJY2 475 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 OR51F1A6NGY5 319 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 PHF2O75151 1096 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 CDC123O75794 336 aaPredicted RBP12.95□□□□□ -0.34
SNX1-214ENST00000625244 ANXA9O76027 345 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 KRT1P04264 644 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 BMP5P22003 454 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 OR4D2P58180 307 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 KRTAP1-1Q07627 177 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 SPA17Q15506 151 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 TYSND1Q2T9J0 566 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 FBXL19-AS1Q494R0 122 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 MFSD7Q6UXD7 560 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 BZW1Q7L1Q6 419 aaKnown RBP12.95□□□□□ -0.34
SNX1-214ENST00000625244 CCDC170Q8IYT3 715 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 CYP4Z2PQ8N1L4 340 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 PLPP5Q8NEB5 264 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 RAD51AP1Q96B01 352 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 CHP1Q99653 195 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 YIPF4Q9BSR8 244 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 C10orf88Q9H8K7 445 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 ALKBH4Q9NXW9 302 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 NFS1Q9Y697 457 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 DUSP10Q9Y6W6 482 aa12.95□□□□□ -0.34
SNX1-214ENST00000625244 IQCF5A8MTL0 148 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 SGK494L7N484 410 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 HAX1O00165 279 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 TXNDC9O14530 226 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 WDR1O75083 606 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 NSA2O95478 260 aaKnown RBP12.94□□□□□ -0.34
SNX1-214ENST00000625244 C1orf105O95561 183 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 IGHG3P01860 377 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 H2AFZP0C0S5 128 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 BMP7P18075 431 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 SPARCL1Q14515 664 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 NAA25Q14CX7 972 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 NDUFA9Q16795 377 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 CATSPEREQ5SY80 951 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 TTC23LQ6PF05 361 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 SEM1Q6ZVN7 128 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 H2AFVQ71UI9 128 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 TRILQ7L0X0 811 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 PCGF5Q86SE9 256 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 NAXEQ8NCW5 288 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 ASZ1Q8WWH4 475 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 QKIQ96PU8 341 aaKnown RBP eCLIP12.94□□□□□ -0.346e-10■■□□□ 13.4
SNX1-214ENST00000625244 PIP5K1AQ99755 562 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 BAG1Q99933 345 aaPredicted RBP12.94□□□□□ -0.34
SNX1-214ENST00000625244 RBCK1Q9BYM8 510 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 MRPS30Q9NP92 439 aaKnown RBP12.94□□□□□ -0.34
SNX1-214ENST00000625244 ACAD8Q9UKU7 415 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 TTC7AQ9ULT0 858 aaPredicted RBP12.94□□□□□ -0.34
SNX1-214ENST00000625244 RUVBL2Q9Y230 463 aaKnown RBP12.94□□□□□ -0.34
SNX1-214ENST00000625244 VPS9D1Q9Y2B5 631 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 SVEP1Q4LDE5 3571 aa12.94□□□□□ -0.34
SNX1-214ENST00000625244 HEATR5BQ9P2D3 2071 aa12.93□□□□□ -0.34
SNX1-214ENST00000625244 A0A0G2JMM0 328 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms