RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 VPS4BO75351 444 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 TSPAN12O95859 305 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 TROVE2P10155 538 aaKnown RBP eCLIP15.42■□□□□ 0.06
CD40-207ENST00000620709 FOLR3P41439 243 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 RAB28P51157 221 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 DCDP81605 110 aaKnown RBP15.42■□□□□ 0.06
CD40-207ENST00000620709 OCRLQ01968 901 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 TTC23LQ6PF05 361 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 MED25Q71SY5 747 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 SPATA21Q7Z572 469 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 PIGWQ7Z7B1 504 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 SLC22A9Q8IVM8 553 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 FDCSPQ8NFU4 85 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 OR6Y1Q8NGX8 325 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 STAG3L4Q8TBR4 150 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 C17orf62Q9BQA9 187 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 VPS4AQ9UN37 437 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 PLCL2Q9UPR0 1127 aa15.42■□□□□ 0.06
CD40-207ENST00000620709 PRRC2CQ9Y520 2896 aaKnown RBP15.42■□□□□ 0.06
CD40-207ENST00000620709 CCDC88CQ9P219 2028 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 SYCE1LA8MT33 242 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 SMIM24O75264 130 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 MAGP20916 626 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 SLC1A6P48664 564 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 RRADP55042 308 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 FOXL2P58012 376 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 DNAJB13P59910 316 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 OR4D1Q15615 310 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 SF1Q15637 639 aaKnown RBP15.41■□□□□ 0.06
CD40-207ENST00000620709 CES4AQ5XG92 561 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 ZNF385CQ66K41 422 aaPredicted RBP15.41■□□□□ 0.06
CD40-207ENST00000620709 CGB2Q6NT52 195 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 DCUN1D3Q8IWE4 304 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 MYO1HQ8N1T3 1032 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 DNAJC22Q8N4W6 341 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 TMEM102Q8N9M5 508 aaPredicted RBP15.41■□□□□ 0.06
CD40-207ENST00000620709 LINC01555Q8NAE3 123 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 CCDC197Q8NCU1 140 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 CPT1CQ8TCG5 803 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 PPP4R1Q8TF05 950 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 EEF1AKMT1Q8WVE0 214 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 SEC16BQ96JE7 1060 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 ATOH8Q96SQ7 321 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 NUDT9Q9BW91 350 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 GPR83Q9NYM4 423 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 ANKMY1Q9P2S6 941 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 RNF112Q9ULX5 631 aa15.41■□□□□ 0.06
CD40-207ENST00000620709 NPEPPSL1A6NEC2 478 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 A8MT66 165 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 EIF3FO00303 357 aaPredicted RBP15.4■□□□□ 0.06
CD40-207ENST00000620709 PEX12O00623 359 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 KPNA5O15131 536 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 GPC4O75487 556 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 IPO13O94829 963 aaKnown RBP15.4■□□□□ 0.06
CD40-207ENST00000620709 TGDSO95455 350 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 AOAHP28039 575 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 GRIA3P42263 894 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 BDKRB1P46663 353 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 GABRA4P48169 554 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 ABCE1P61221 599 aaKnown RBP15.4■□□□□ 0.06
CD40-207ENST00000620709 RHBDD2Q6NTF9 364 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 TLDC1Q6P9B6 456 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 UNC5DQ6UXZ4 953 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 ZNF771Q7L3S4 317 aaPredicted RBP15.4■□□□□ 0.06
CD40-207ENST00000620709 CRLF3Q8IUI8 442 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 MCATQ8IVS2 390 aaKnown RBP15.4■□□□□ 0.06
CD40-207ENST00000620709 ANKS4BQ8N8V4 417 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 PROKR1Q8TCW9 393 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 GBP5Q96PP8 586 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 GATA5Q9BWX5 397 aaPredicted RBP15.4■□□□□ 0.06
CD40-207ENST00000620709 SRPK3Q9UPE1 567 aa15.4■□□□□ 0.06
CD40-207ENST00000620709 LRRK2Q5S007 2527 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 CDC7O00311 574 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 DPM1O60762 260 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 ENO3P13929 434 aaPredicted RBP15.39■□□□□ 0.05
CD40-207ENST00000620709 TSNQ15631 228 aaKnown RBP15.39■□□□□ 0.05
CD40-207ENST00000620709 TTLL10Q6ZVT0 673 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 PIWIL4Q7Z3Z4 852 aaKnown RBP15.39■□□□□ 0.05
CD40-207ENST00000620709 MRGPREQ86SM8 312 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 ADAMTSL2Q86TH1 951 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 OR2L8Q8NGY9 312 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 EXT2Q93063 718 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 COL26A1Q96A83 441 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 SLC22A18Q96BI1 424 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 SLAMF7Q9NQ25 335 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 INTS7Q9NVH2 962 aaKnown RBP15.39■□□□□ 0.05
CD40-207ENST00000620709 KLHL14Q9P2G3 628 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 TMCO1Q9UM00 188 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 FER1L5A0AVI2 2057 aa15.39■□□□□ 0.05
CD40-207ENST00000620709 KRT87PA6NCN2 255 aa15.38■□□□□ 0.05
CD40-207ENST00000620709 SUPT3HB4E1H0 165 aa15.38■□□□□ 0.05
CD40-207ENST00000620709 H3BMH7 237 aa15.38■□□□□ 0.05
CD40-207ENST00000620709 ITM2AO43736 263 aa15.38■□□□□ 0.05
CD40-207ENST00000620709 SUPT3HO75486 399 aa15.38■□□□□ 0.05
CD40-207ENST00000620709 KLF7O75840 302 aaPredicted RBP15.38■□□□□ 0.05
CD40-207ENST00000620709 SLCO2B1O94956 709 aa15.38■□□□□ 0.05
CD40-207ENST00000620709 HSPA4LO95757 839 aa15.38■□□□□ 0.05
CD40-207ENST00000620709 GNLYP22749 145 aa15.38■□□□□ 0.05
CD40-207ENST00000620709 SERPINB5P36952 375 aa15.38■□□□□ 0.05
CD40-207ENST00000620709 UQCRFS1P47985 274 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms