RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 DEPDC1Q5TB30 811 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 STPG1Q5TH74 334 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 CACHD1Q5VU97 1274 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 ZNF574Q6ZN55 896 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 FAM92BQ6ZTR7 304 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 ACAD11Q709F0 780 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 VN1R5Q7Z5H4 357 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 MCATQ8IVS2 390 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 NAXDQ8IW45 347 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 DNAJC22Q8N4W6 341 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 CCDC197Q8NCU1 140 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 TRPV3Q8NET8 790 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 OR2T11Q8NH01 316 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 CREB3L4Q8TEY5 395 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 KLHL6Q8WZ60 621 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 TUBGCP3Q96CW5 907 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 CMTM7Q96FZ5 175 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 TCTN2Q96GX1 697 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 METTL2AQ96IZ6 378 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 PPP1R36Q96LQ0 422 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 RILPQ96NA2 401 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 OR2A5Q96R48 311 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 OR52B2Q96RD2 323 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 PHOX2BQ99453 314 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 MTERF1Q99551 399 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 SERPINI1Q99574 410 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 KLHL25Q9H0H3 589 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 FAM60AQ9NP50 221 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 TCF7L2Q9NQB0 619 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 DMRT3Q9NQL9 472 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 RIC8BQ9NVN3 520 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 NMRK1Q9NWW6 199 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 HEY2Q9UBP5 337 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 VPS29Q9UBQ0 182 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 FTSJ1Q9UET6 329 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 ZFP69BQ9UJL9 534 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 PTGDR2Q9Y5Y4 395 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 AP1M2Q9Y6Q5 423 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 ARID1BQ8NFD5 2236 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 WDFY4Q6ZS81 3184 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 DNAH14Q0VDD8 3507 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 FANCMQ8IYD8 2048 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 CUL9Q8IWT3 2517 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 IGHV5-51A0A0C4DH38 117 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 A0A0J9YVX5 310 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 H0YGG7 62 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 NTN3O00634 580 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 LSM1O15116 133 aaKnown RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 CASC3O15234 703 aaKnown RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 GDF9O60383 454 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 NRP2O60462 931 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 SRPX2O60687 465 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 PEX11AO75192 247 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 RSL1D1O76021 490 aaKnown RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 TBX6O95947 436 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 TGFB1P01137 390 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 SERPINA6P08185 405 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 LBPP18428 481 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 CSF2RBP32927 897 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 GCGRP47871 477 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 LIMK1P53667 647 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 ARF3P61204 181 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 E2F1Q01094 437 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 HMGCS1Q01581 520 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 EMX2Q04743 252 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 ILKQ13418 452 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 PWP1Q13610 501 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 CUL3Q13618 768 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 KIAA0040Q15053 153 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 IMPG1Q17R60 797 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 AP5B1Q2VPB7 878 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 SPDYAQ5MJ70 313 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 C6orf136Q5SQH8 315 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 MANEAQ5SRI9 462 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 NXNQ6DKJ4 435 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 ADNP2Q6IQ32 1131 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 OGFOD2Q6N063 350 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 CHSY3Q70JA7 882 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 RNF44Q7L0R7 432 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 ASCL5Q7RTU5 278 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 PRSS42Q7Z5A4 293 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 ARHGAP22Q7Z5H3 698 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 SPATA19Q7Z5L4 167 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 PIP4P1Q86T03 277 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 KMT5CQ86Y97 462 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 CACNA2D3Q8IZS8 1091 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 RNF175Q8N4F7 328 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 C19orf47Q8N9M1 422 aaKnown RBP7.67□□□□□ -1.18
CPNE3-209ENST00000620393 OR4D9Q8NGE8 314 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 WDR48Q8TAF3 677 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 CHTF18Q8WVB6 975 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 SLC13A3Q8WWT9 602 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 TM4SF19Q96DZ7 209 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 PPP3R2Q96LZ3 170 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 FCRL4Q96PJ5 515 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 HBEGFQ99075 208 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 ZFYVE21Q9BQ24 234 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 NUDT22Q9BRQ3 303 aa7.67□□□□□ -1.18
CPNE3-209ENST00000620393 MS4A8Q9BY19 250 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms