RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 CSTF3Q12996 717 aaKnown RBP15.13■□□□□ 0.01
CPSF1-213ENST00000620219 RPA4Q13156 261 aa15.13■□□□□ 0.01
CPSF1-213ENST00000620219 SPIN4Q56A73 249 aa15.13■□□□□ 0.01
CPSF1-213ENST00000620219 TMEM184AQ6ZMB5 413 aa15.13■□□□□ 0.01
CPSF1-213ENST00000620219 DOK4Q8TEW6 326 aa15.13■□□□□ 0.01
CPSF1-213ENST00000620219 CLIC1O00299 241 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 SRFP11831 508 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 NTSP30990 170 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 PTGER1P34995 402 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 FOLH1Q04609 750 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 USP39Q53GS9 565 aaKnown RBP15.12■□□□□ 0.01
CPSF1-213ENST00000620219 CAPRIN2Q6IMN6 1127 aaKnown RBP15.12■□□□□ 0.01
CPSF1-213ENST00000620219 TNFAIP8L2Q6P589 184 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-213ENST00000620219 COMMD6Q7Z4G1 85 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 CDX2Q99626 313 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-213ENST00000620219 C1QTNF2Q9BXJ5 285 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 GEMIN8Q9NWZ8 242 aaKnown RBP15.12■□□□□ 0.01
CPSF1-213ENST00000620219 LAMP1P11279 417 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 ANXA8L1Q5VT79 327 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 XAGE5Q8WWM1 108 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 RAB11FIP5Q9BXF6 653 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 SPATA6Q9NWH7 488 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-213ENST00000620219 KLK8O60259 260 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 NPPBP16860 134 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 ENGP17813 658 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 NFATC4Q14934 902 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 BCL7AQ4VC05 210 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 GRHL2Q6ISB3 625 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 OGFOD2Q6N063 350 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 YIPF4Q9BSR8 244 aa15.12■□□□□ 0.01
CPSF1-213ENST00000620219 RHPN2P1A8MT19 583 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 AGAP14A8MT82 685 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 IL3P08700 152 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 NDUFS1P28331 727 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 BTN3A2P78410 334 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 CDKL1Q00532 357 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 INPP5KQ9BT40 448 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 TBC1D29Q9UFV1 150 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 RAB23Q9ULC3 237 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 A0A1W2PRB8 838 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 PRAMEF26H0Y7S4 382 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 BTN3A3O00478 584 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 DEAF1O75398 565 aaPredicted RBP15.11■□□□□ 0.01
CPSF1-213ENST00000620219 MAGP20916 626 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 CD6P30203 668 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 OR4D2P58180 307 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 FGL2Q14314 439 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 HEPACAMQ14CZ8 416 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 CDKL4Q5MAI5 379 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 GALNT10Q86SR1 603 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 OR5K2Q8NHB8 316 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 WDR48Q8TAF3 677 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 OTUB1Q96FW1 271 aaPredicted RBP15.11■□□□□ 0.01
CPSF1-213ENST00000620219 GPRC5BQ9NZH0 403 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 C6orf203Q9P0P8 240 aaPredicted RBP15.11■□□□□ 0.01
CPSF1-213ENST00000620219 ABCA7Q8IZY2 2146 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 A8MU76 341 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 PGM3O95394 542 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 C9P02748 559 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 PVRP15151 417 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 HPCAP84074 193 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 TOR1AIP1Q5JTV8 583 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 METRNLQ641Q3 311 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 SPESP1Q6UW49 350 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 NUDT13Q86X67 352 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 LZICQ8WZA0 190 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 UGT2B28Q9BY64 529 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 COQ10BQ9H8M1 238 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 PSME2Q9UL46 239 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 TMED5Q9Y3A6 229 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 AP4B1Q9Y6B7 739 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 PLRG1O43660 514 aaKnown RBP15.11■□□□□ 0.01
CPSF1-213ENST00000620219 CCNDBP1O95273 360 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 MATN4O95460 622 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 C6orf47O95873 294 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 TIA1P31483 386 aaKnown RBP eCLIP15.11■□□□□ 0.01
CPSF1-213ENST00000620219 ZNF763Q0D2J5 394 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 RPE65Q16518 533 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 LPAL2Q16609 132 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 ST13P4Q8IZP2 240 aaPredicted RBP15.11■□□□□ 0.01
CPSF1-213ENST00000620219 DNASE1L2Q92874 299 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 RGMAQ96B86 450 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 BIRC7Q96CA5 298 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 ADNPQ9H2P0 1102 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 ZNF385DQ9H6B1 395 aa15.11■□□□□ 0.01
CPSF1-213ENST00000620219 AP1G1O43747 822 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 ALAS2P22557 587 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 YAP1P46937 504 aaKnown RBP15.1■□□□□ 0.01
CPSF1-213ENST00000620219 CLCA4Q14CN2 919 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 DEFB110Q30KQ9 67 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 FAM110BQ8TC76 370 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 SLC6A18Q96N87 628 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 OR4K3Q96R72 315 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 BDH2Q9BUT1 245 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 VAPAQ9P0L0 249 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 OPN1SWP03999 348 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 CEACAM5P06731 702 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 ID2Q02363 134 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 RCAN2Q14206 197 aa15.1■□□□□ 0.01
CPSF1-213ENST00000620219 SELPLGQ14242 412 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms