RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 CPPED1Q9BRF8 314 aaPredicted RBP12.82□□□□□ -0.36
CYFIP1-211ENST00000619348 CD244Q9BZW8 370 aa12.82□□□□□ -0.36
CYFIP1-211ENST00000619348 MAGIXQ9H6Y5 334 aa12.82□□□□□ -0.36
CYFIP1-211ENST00000619348 ACSL6Q9UKU0 697 aa12.82□□□□□ -0.36
CYFIP1-211ENST00000619348 MRPS7Q9Y2R9 242 aaKnown RBP12.82□□□□□ -0.36
CYFIP1-211ENST00000619348 AP3M1Q9Y2T2 418 aa12.82□□□□□ -0.36
CYFIP1-211ENST00000619348 A0A0G2JLL6 359 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 GSAPA4D1B5 854 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CXCL11O14625 94 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 PRAMEF11O60813 436 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 PEX11BO96011 259 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 TYMPP19971 482 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CYP2A7P20853 494 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 SLC11A2P49281 568 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CXCR4P61073 352 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ZNF267Q14586 743 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 LEXMQ3ZCV2 418 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 SETMARQ53H47 684 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CAPN13Q6MZZ7 669 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 PRRT2Q7Z6L0 340 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CCDC71Q8IV32 467 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 UBQLNLQ8IYU4 475 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ADGRG2Q8IZP9 1017 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ZBTB2Q8N680 514 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 C8orf48Q96LL4 319 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 SNX18Q96RF0 628 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ANKHQ9HCJ1 492 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ELOVL2Q9NXB9 296 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ING3Q9NXR8 418 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 NDRG4Q9ULP0 352 aaKnown RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 MAU2Q9Y6X3 613 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 PHIPQ8WWQ0 1821 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 COL4A5P29400 1685 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ARID1BQ8NFD5 2236 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CCL15-CCL14A0A0B4J2E2 113 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 WNT9AO14904 365 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CASKO14936 926 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ALX3O95076 343 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 PRKCDQ05655 676 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 NCF4Q15080 339 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CCL15Q16663 113 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CPTPQ5TA50 214 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 HMGN2P46Q86SG4 172 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 YIPF7Q8N8F6 280 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 C11orf65Q8NCR3 313 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 OR4A15Q8NGL6 344 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 LRRC20Q8TCA0 184 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ART5Q96L15 291 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 NIPSNAP1Q9BPW8 284 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ZNF224Q9NZL3 707 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 DHRS7Q9Y394 339 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 SPIN1Q9Y657 262 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 NT5C1B-RDH14C9J2C7 533 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 LAMP1P11279 417 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 ENDOUP21128 410 aaKnown RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 PBLDP30039 288 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 RPS19P39019 145 aaKnown RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 MAPK12P53778 367 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CLPPQ16740 277 aaPredicted RBP12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 PTCHD3Q3KNS1 767 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 GPAT3Q53EU6 434 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 KRT74Q7RTS7 529 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 C16orf62Q7Z3J2 963 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 BBS7Q8IWZ6 715 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 LKAAEAR1Q8TD35 194 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 RTP3Q9BQQ7 232 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 WACQ9BTA9 647 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 CLMPQ9H6B4 373 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 TVP23BQ9NYZ1 205 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 PSORS1C1Q9UIG5 152 aa12.81□□□□□ -0.36
CYFIP1-211ENST00000619348 A0A1W2PQL4 384 aaPredicted RBP12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 HNRNPCL2B2RXH8 293 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 TSPAN12O95859 305 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 JUNDP17535 347 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 SDC1P18827 310 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 HOXA9P31269 272 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 ZNF140P52738 457 aaPredicted RBP12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 YBEYP58557 167 aaPredicted RBP12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 ABRQ12979 859 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 DUSP4Q13115 394 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 SNAPC1Q16533 368 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 UPP1Q16831 310 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 WSCD2Q2TBF2 565 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 CRTC2Q53ET0 693 aaPredicted RBP12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 DEF8Q6ZN54 512 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 CHPFQ8IZ52 775 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 FAM129BQ96TA1 746 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 TMEM39AQ9NV64 488 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 SLC6A14Q9UN76 642 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 LRRC37AA6NMS7 1700 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 ADAMDEC1O15204 470 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 GADD45GO95257 159 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 PRAMEF12O95522 483 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 CLEC2LP0C7M8 214 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 ETFAP13804 333 aa12.8□□□□□ -0.36
CYFIP1-211ENST00000619348 PTPN2P17706 415 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms