RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 ACOT13Q9NPJ3 140 aa4.17□□□□□ -1.74
SEC22B-202ENST00000618538 RASSF1Q9NS23 344 aa4.17□□□□□ -1.74
SEC22B-202ENST00000618538 RLIMQ9NVW2 624 aa4.17□□□□□ -1.74
SEC22B-202ENST00000618538 SPATA6Q9NWH7 488 aaPredicted RBP4.17□□□□□ -1.74
SEC22B-202ENST00000618538 TRNAU1APQ9NX07 287 aaKnown RBP4.17□□□□□ -1.74
SEC22B-202ENST00000618538 SELENONQ9NZV5 590 aa4.17□□□□□ -1.74
SEC22B-202ENST00000618538 ABT1Q9ULW3 272 aaKnown RBP4.17□□□□□ -1.74
SEC22B-202ENST00000618538 HS3ST2Q9Y278 367 aa4.17□□□□□ -1.74
SEC22B-202ENST00000618538 PCDHGA6Q9Y5G7 932 aa4.17□□□□□ -1.74
SEC22B-202ENST00000618538 A0A1W2PRU2 124 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 SERTM1A2A2V5 107 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 OR2A25A4D2G3 310 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 OR2AG2A6NM03 316 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 POM121CA8CG34 1229 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 GABRR3A8MPY1 467 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 MAGEB17A8MXT2 336 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 MYO1GB0I1T2 1018 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CFAP99D6REC4 459 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 M0R082 166 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 LILRB3O75022 631 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 ATP6V1G1O75348 118 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 GMNNO75496 209 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 RECQL5O94762 991 aaPredicted RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CPSF4O95639 269 aaKnown RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 VIPP01282 170 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 OPN1SWP03999 348 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CKMP06732 381 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CTSLP07711 333 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 ZNF12P17014 697 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 FPR1P21462 350 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 LIPAP38571 399 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 OPRD1P41143 372 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 HALP42357 657 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 BDKRB1P46663 353 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 PREPP48147 710 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 HNRNPFP52597 415 aaKnown RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 METAP1P53582 386 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CRISP3P54108 245 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 DEFB103AP81534 67 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 IL1RL1Q01638 556 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 GUCA2AQ02747 115 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 EPS8Q12929 822 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 IL18R1Q13478 541 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 DDX39BQ13838 428 aaKnown RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 KEAP1Q14145 624 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 DOC2AQ14183 400 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 ACOX1Q15067 660 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 TAF12Q16514 161 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 ZNF658BQ4V348 819 aaPredicted RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 SOWAHCQ53LP3 525 aaPredicted RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CDKL4Q5MAI5 379 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 COX20Q5RI15 118 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 PERM1Q5SV97 790 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 LYPLAL1Q5VWZ2 237 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 C16orf87Q6PH81 154 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CCDC81Q6ZN84 652 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 Q6ZVL8 140 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CBLL1Q75N03 491 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 OTOP2Q7RTS6 562 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 DSG4Q86SJ6 1040 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 TRIM74Q86UV6 250 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 TRIM73Q86UV7 250 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 TMEM25Q86YD3 366 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 SYT12Q8IV01 421 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 RBM12BQ8IXT5 1001 aaKnown RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 MMP21Q8N119 569 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CPXM2Q8N436 756 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 C1orf52Q8N6N3 182 aaKnown RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 TTC29Q8NA56 475 aaPredicted RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 DDHD1Q8NEL9 900 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 OR8J2Q8NGG1 315 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 OR2A12Q8NGT7 310 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 CDC26Q8NHZ8 85 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 SKA2Q8WVK7 121 aaPredicted RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 SORCS1Q8WY21 1168 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 ITFG2Q969R8 447 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 ZNF689Q96CS4 500 aaPredicted RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 MAGED4Q96JG8 741 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 PANX1Q96RD7 426 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 ZNF347Q96SE7 839 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 SH3GL1Q99961 368 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 SLC46A2Q9BY10 475 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 SPNS1Q9H2V7 528 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 PALMDQ9NP74 551 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 POLE4Q9NR33 117 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 DNAJC11Q9NVH1 559 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 THUMPD1Q9NXG2 353 aaKnown RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 PDP1Q9P0J1 537 aaPredicted RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 GDF2Q9UK05 429 aaPredicted RBP4.16□□□□□ -1.74
SEC22B-202ENST00000618538 SNX6Q9UNH7 406 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 RNF6Q9Y252 685 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 B3GNT3Q9Y2A9 372 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 HCFC2Q9Y5Z7 792 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 PTPRSQ13332 1948 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 LTBP2Q14767 1821 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 REV3LO60673 3130 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 PCM1Q15154 2024 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 ALPK3Q96L96 1907 aa4.16□□□□□ -1.74
SEC22B-202ENST00000618538 TMEM247A6NEH6 219 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms