RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 RAB12Q6IQ22 244 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 LAPTM4BQ86VI4 370 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 TSPYL5Q86VY4 417 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CDAN1Q8IWY9 1227 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 COPS5Q92905 334 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SFXN2Q96NB2 322 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 KCNA7Q96RP8 456 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CACYBPQ9HB71 228 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CASS4Q9NQ75 786 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 LYARQ9NX58 379 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 MS4A12Q9NXJ0 267 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ARAP2Q8WZ64 1704 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 AKAP8O43823 692 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SLC43A1O75387 559 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 AHSGP02765 367 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 MAPTP10636 758 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NMBRP28336 390 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 DNAJA1P31689 397 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ATP4BP51164 291 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SNRPEP62304 92 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 BLOC1S1P78537 153 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ZNF91Q05481 1191 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SLC3A1Q07837 685 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 LRRC32Q14392 662 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ETFDHQ16134 617 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 PROX2Q3B8N5 592 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SUPT20HL1Q3ZLR7 823 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 PAGE3Q5JUK9 113 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CELF3Q5SZQ8 465 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 LIPKQ5VXJ0 399 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CNIH2Q6PI25 160 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 BLOC1S3Q6QNY0 202 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 KIAA1958Q8N8K9 716 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NIPA2Q8N8Q9 360 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SFT2D1Q8WV19 159 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 TMEM209Q96SK2 561 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ATXN3LQ9H3M9 355 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NYAP2Q9P242 653 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ELF5Q9UKW6 265 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 POFUT2Q9Y2G5 429 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 OR10H1Q9Y4A9 318 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 POLR3HQ9Y535 204 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SPIN1Q9Y657 262 aaPredicted RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 A0A1B0GVI7 797 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SPATA31C2B4DYI2 1134 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SULT1C2O00338 296 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 PCDH17O14917 1159 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 DSCR3O14972 297 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ANKRD28O15084 1053 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ARPC5O15511 151 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 GDF11O95390 407 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NFICP08651 508 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NR2F6P10588 404 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 GPX3P22352 226 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 KLRK1P26718 216 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 NUMBP49757 651 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SULT1E1P49888 294 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 TPI1P60174 286 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CXCR4P61073 352 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 RBP5P82980 135 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 RIPPLY1Q0D2K3 151 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ALKBH1Q13686 389 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SF3A2Q15428 464 aaKnown RBP7.17□□□□□ -1.26
PDE6A-205ENST00000617647 TMEM179Q6ZVK1 233 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 FGD2Q7Z6J4 655 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 RDH10Q8IZV5 341 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 TOMM5Q8N4H5 51 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 MCPH1Q8NEM0 835 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 ZFP42Q96MM3 310 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 SLC38A3Q99624 504 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 TMEM175Q9BSA9 504 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 DUSP21Q9H596 190 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 OR6C2Q9NZP2 312 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CTSFQ9UBX1 484 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 RPS6KA6Q9UK32 745 aa7.17□□□□□ -1.26
PDE6A-205ENST00000617647 CLCA1A8K7I4 914 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 ARVCFO00192 962 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 FPGTO14772 594 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 DHX15O43143 795 aaKnown RBP7.16□□□□□ -1.26
PDE6A-205ENST00000617647 SDC3O75056 442 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 SIX3O95343 332 aaPredicted RBP7.16□□□□□ -1.26
PDE6A-205ENST00000617647 CPSF4O95639 269 aaKnown RBP7.16□□□□□ -1.26
PDE6A-205ENST00000617647 CSF3P09919 207 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 PEPDP12955 493 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 SOX3P41225 446 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 DGKEP52429 567 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 PPP3R1P63098 170 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 NPRL3Q12980 569 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 SPP2Q13103 211 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 CAMK2GQ13555 558 aaPredicted RBP7.16□□□□□ -1.26
PDE6A-205ENST00000617647 MTMR1Q13613 665 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 TBCEQ15813 527 aaPredicted RBP7.16□□□□□ -1.26
PDE6A-205ENST00000617647 IDNKQ5T6J7 187 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 NUDT18Q6ZVK8 323 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 RASGRP3Q8IV61 690 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 MAP4K3Q8IVH8 894 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 DCUN1D3Q8IWE4 304 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 TMEM185AQ8NFB2 350 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 SNX33Q8WV41 574 aa7.16□□□□□ -1.26
PDE6A-205ENST00000617647 SLC13A3Q8WWT9 602 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms