RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 HNRNPFP52597 415 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 CYP4F2P78329 520 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 PHEXP78562 749 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 FBXO30Q8TB52 745 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 DNASE1L2Q92874 299 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 SORBS1Q9BX66 1292 aaKnown RBP16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 PELI2Q9HAT8 420 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 PCDHGB4Q9UN71 923 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 PCDHGB5Q9Y5G0 923 aa16.65■□□□□ 0.26
PCDHGC3-205ENST00000617641 TCRBV21S2A2A0A5A6 115 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 PRSS38A1L453 326 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 SHISA7A6NL88 538 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 H7BY64 318 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 KLHL18O94889 574 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 KLK1P06870 262 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 ZNF385BQ569K4 471 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 COL13A1Q5TAT6 717 aaPredicted RBP16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 ENPP6Q6UWR7 440 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 METTL4Q8N3J2 472 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 MARVELD2Q8N4S9 558 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 CBR4Q8N4T8 237 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 ANKRD53Q8N9V6 530 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 SNX19Q92543 992 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 NCLNQ969V3 563 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 FAM162AQ96A26 154 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 CNBD2Q96M20 576 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 PRAP1Q96NZ9 151 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 AIF1LQ9BQI0 150 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 WASH6PQ9NQA3 447 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 SIRT5Q9NXA8 310 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 UBAP1Q9NZ09 502 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 SH3BP4Q9P0V3 963 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 OAZ3Q9UMX2 235 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 TSC22D4Q9Y3Q8 395 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 FEZF1A0PJY2 475 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 DPPA5A6NC42 116 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 H0YJX3 145 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 CLIC1O00299 241 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 ENGP17813 658 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 TPMTP51580 245 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 CCR8P51685 355 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 MC1RQ01726 317 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 ABHD18Q0P651 414 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 GK3PQ14409 553 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 KRT33BQ14525 404 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 ATP6AP1Q15904 470 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 EOGTQ5NDL2 527 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 TPRG1LQ5T0D9 272 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 PPP4R4Q6NUP7 873 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 UGT2A3Q6UWM9 527 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 CHRDL2Q6WN34 429 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 CAMKMTQ7Z624 323 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 ASB12Q8WXK4 309 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 COQ8BQ96D53 544 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 PDXPQ96GD0 296 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 SCARF2Q96GP6 870 aaPredicted RBP16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 PCBD2Q9H0N5 130 aa16.64■□□□□ 0.25
PCDHGC3-205ENST00000617641 A6NHS1 94 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 SCELO95171 688 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 EPN2O95208 641 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 TBX6O95947 436 aaPredicted RBP16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 PTX3P26022 381 aaPredicted RBP16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 UAP1L1Q3KQV9 507 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 RAB42Q8N4Z0 105 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 ABHD11Q8NFV4 315 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 C16orf78Q8WTQ4 265 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR1E3Q8WZA6 343 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 PRPF18Q99633 342 aaKnown RBP16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 REEP4Q9H6H4 257 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 SCHIP1Q9P0W5 487 aaPredicted RBP16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 ANKDD1BA6NHY2 528 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 EVPLLA8MZ36 301 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 CREG1O75629 220 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 LDLRP01130 860 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 GABRG2P18507 467 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 RAB28P51157 221 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 REEP5Q00765 189 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 CCINQ13939 588 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 NKG7Q16617 165 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 FAM98BQ52LJ0 330 aaKnown RBP16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 INTS11Q5TA45 600 aaKnown RBP16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 ENPP7Q6UWV6 458 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 FLCNQ8NFG4 579 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 PNPT1Q8TCS8 783 aaKnown RBP16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 REXO5Q96IC2 774 aaKnown RBP16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 OR2M4Q96R27 311 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 RHBGQ9H310 441 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 ATP6V1HQ9UI12 483 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 MAPRE3Q9UPY8 281 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 MYO10Q9HD67 2058 aa16.63■□□□□ 0.25
PCDHGC3-205ENST00000617641 KCNJ13O60928 360 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 RAP2AP10114 183 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 PKLRP30613 574 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 CHN2P52757 468 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 TAS2R50P59544 299 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 KIAA1024LP59773 190 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 CHRNB3Q05901 458 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 MAP7Q14244 749 aa16.62■□□□□ 0.25
PCDHGC3-205ENST00000617641 RPE65Q16518 533 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms