RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 UGT2A1Q9Y4X1 527 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 ASCC3Q8N3C0 2202 aaKnown RBP13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 TCRBV5S2A0A599 114 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 H3BQ06 376 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 NUAK1O60285 661 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 FKBP9O95302 570 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 TGFB1P01137 390 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 DBTP11182 482 aaKnown RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 TIMP2P16035 220 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 CLK3P49761 638 aaKnown RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 DGKEP52429 567 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 CHRNB3Q05901 458 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 SIM2Q14190 667 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 SDE2Q6IQ49 451 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 FKBP9P1Q75LS8 142 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 DEPDC4Q8N2C3 294 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 MINDY1Q8N5J2 469 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 ATL1Q8WXF7 558 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 RSPRY1Q96DX4 576 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 OSBPL10Q9BXB5 764 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 ASPSCR1Q9BZE9 553 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 ABCD2Q9UBJ2 740 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 OARD1Q9Y530 152 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 PCDHA9Q9Y5H5 950 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 E7EQ34 232 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 MOSPD3O75425 235 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 KCNK2O95069 426 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 EFEMP2O95967 443 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 HRH2P25021 359 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 PTGER1P34995 402 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 SOX9P48436 509 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 EMX1Q04741 257 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 TMEM115Q12893 351 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 SHHQ15465 462 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 OR6Q1Q8NGQ2 317 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 BPIFB1Q8TDL5 484 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 MUL1Q969V5 352 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 FAM120BQ96EK7 910 aaKnown RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 AMBRA1Q9C0C7 1298 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 SPTBN2O15020 2390 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 TRANK1O15050 2925 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 FAM234BA2RU67 622 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 BBIP1A8MTZ0 92 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 H7C0S8 307 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 PRKD3O94806 890 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 OLFM2O95897 454 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 CST1P01037 141 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 CDKN2CP42773 168 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 CDKN3Q16667 212 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 GPR33Q49SQ1 333 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 RBM48Q5RL73 367 aaKnown RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 ZCCHC8Q6NZY4 707 aaKnown RBP13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 MICU2Q8IYU8 434 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 CLECL1Q8IZS7 167 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 CELF2-AS1Q8N7Q2 184 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 RASGEF1AQ8N9B8 481 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 TPD52L3Q96J77 140 aa13.98□□□□□ -0.17
SHROOM1-208ENST00000617339 H0YAE9 185 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 SLC1A7O00341 560 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 PRAMEF4O60810 478 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 SOCS5O75159 536 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 ALPLP05186 524 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 MAPK8P45983 427 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 SYT16Q17RD7 645 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 UAP1L1Q3KQV9 507 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 PRAMEF9Q5VWM5 478 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 ZNF783Q6ZMS7 281 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 P2RY8Q86VZ1 359 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 HID1Q8IV36 788 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 CNDP2Q96KP4 475 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 PPP3R2Q96LZ3 170 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 SLC32A1Q9H598 525 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 ADPRHL2Q9NX46 363 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 SPASTQ9UBP0 616 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 IL36AQ9UHA7 158 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 RIMKLBQ9ULI2 386 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3DA0A087WVF3 549 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3IA0A087WXS9 549 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3EA0A087X179 549 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3KA0A087X1G2 549 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3FA6NER0 549 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3LB9A6J9 549 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3HP0C7X1 549 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 CYP2A6P11509 494 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 CLK1P49759 484 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 HIST2H2ACQ16777 129 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3GQ6DHY5 549 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3CQ6IPX1 549 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TBC1D3Q8IZP1 549 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 CSGALNACT1Q8TDX6 532 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 ASZ1Q8WWH4 475 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 PANX1Q96RD7 426 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TM7SF3Q9NS93 570 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 C1orf109Q9NX04 203 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 STOML2Q9UJZ1 356 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 NDRG2Q9UN36 371 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 HEPACAM2A8MVW5 462 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 hCG_2039718K7EN88 272 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 MITFO75030 526 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms